Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC23.09■■□□□ 1.29
CLCN1P35523 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC23.09■■□□□ 1.29
CLCN1P35523 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC23.09■■□□□ 1.29
CLCN1P35523 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC23.09■■□□□ 1.29
CLCN1P35523 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
CLCN1P35523 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC23.09■■□□□ 1.29
CLCN1P35523 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
CLCN1P35523 AC110285.6-201ENST00000617652 491 ntBASIC23.09■■□□□ 1.29
CLCN1P35523 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLCN1P35523 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC23.09■■□□□ 1.29
CLCN1P35523 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLCN1P35523 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLCN1P35523 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CLCN1P35523 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
CLCN1P35523 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC23.08■■□□□ 1.29
CLCN1P35523 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.08■■□□□ 1.29
CLCN1P35523 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.08■■□□□ 1.29
CLCN1P35523 PBX2P1-201ENST00000493219 1291 ntBASIC23.08■■□□□ 1.29
CLCN1P35523 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.08■■□□□ 1.29
CLCN1P35523 AC233992.3-201ENST00000607491 485 ntBASIC23.08■■□□□ 1.29
CLCN1P35523 AC106739.1-201ENST00000617035 715 ntBASIC23.08■■□□□ 1.29
CLCN1P35523 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
CLCN1P35523 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CLCN1P35523 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
CLCN1P35523 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC23.08■■□□□ 1.29
CLCN1P35523 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CLCN1P35523 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CLCN1P35523 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
CLCN1P35523 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC23.08■■□□□ 1.29
CLCN1P35523 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
CLCN1P35523 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CLCN1P35523 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
CLCN1P35523 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC23.08■■□□□ 1.28
CLCN1P35523 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CLCN1P35523 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC23.08■■□□□ 1.28
CLCN1P35523 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
CLCN1P35523 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLCN1P35523 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLCN1P35523 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC23.07■■□□□ 1.28
CLCN1P35523 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
CLCN1P35523 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
CLCN1P35523 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLCN1P35523 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CLCN1P35523 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLCN1P35523 NOC2LP1-202ENST00000452600 2235 ntBASIC23.07■■□□□ 1.28
CLCN1P35523 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
CLCN1P35523 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLCN1P35523 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.07■■□□□ 1.28
CLCN1P35523 AC133561.4-201ENST00000566112 224 ntBASIC23.07■■□□□ 1.28
CLCN1P35523 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
CLCN1P35523 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC23.07■■□□□ 1.28
CLCN1P35523 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLCN1P35523 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLCN1P35523 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CLCN1P35523 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CLCN1P35523 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CLCN1P35523 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CLCN1P35523 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.06■■□□□ 1.28
CLCN1P35523 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CLCN1P35523 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.06■■□□□ 1.28
CLCN1P35523 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.06■■□□□ 1.28
CLCN1P35523 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.06■■□□□ 1.28
CLCN1P35523 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CLCN1P35523 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CLCN1P35523 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
CLCN1P35523 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CLCN1P35523 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC23.06■■□□□ 1.28
CLCN1P35523 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
CLCN1P35523 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC23.06■■□□□ 1.28
CLCN1P35523 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC23.05■■□□□ 1.28
CLCN1P35523 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC23.05■■□□□ 1.28
CLCN1P35523 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CLCN1P35523 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC23.05■■□□□ 1.28
CLCN1P35523 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC23.05■■□□□ 1.28
CLCN1P35523 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CLCN1P35523 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.05■■□□□ 1.28
CLCN1P35523 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.05■■□□□ 1.28
CLCN1P35523 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CLCN1P35523 TCF3P1-201ENST00000423021 1937 ntBASIC23.05■■□□□ 1.28
CLCN1P35523 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC23.05■■□□□ 1.28
CLCN1P35523 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
CLCN1P35523 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CLCN1P35523 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CLCN1P35523 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
CLCN1P35523 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CLCN1P35523 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC23.05■■□□□ 1.28
CLCN1P35523 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC23.04■■□□□ 1.28
CLCN1P35523 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CLCN1P35523 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CLCN1P35523 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CLCN1P35523 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CLCN1P35523 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CLCN1P35523 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC23.04■■□□□ 1.28
CLCN1P35523 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC23.04■■□□□ 1.28
CLCN1P35523 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
CLCN1P35523 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.04■■□□□ 1.28
CLCN1P35523 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CLCN1P35523 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CLCN1P35523 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CLCN1P35523 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms