Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
VARSP26640 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VARSP26640 AP005212.1-201ENST00000581547 1997 ntBASIC19.95■□□□□ 0.78
VARSP26640 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VARSP26640 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
VARSP26640 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
VARSP26640 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VARSP26640 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.95■□□□□ 0.78
VARSP26640 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.95■□□□□ 0.78
VARSP26640 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VARSP26640 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
VARSP26640 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.95■□□□□ 0.78
VARSP26640 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.95■□□□□ 0.78
VARSP26640 SLC7A5P1-201ENST00000568957 537 ntBASIC19.95■□□□□ 0.78
VARSP26640 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.95■□□□□ 0.78
VARSP26640 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VARSP26640 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.95■□□□□ 0.78
VARSP26640 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
VARSP26640 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VARSP26640 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VARSP26640 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VARSP26640 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VARSP26640 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VARSP26640 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
VARSP26640 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.94■□□□□ 0.78
VARSP26640 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VARSP26640 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
VARSP26640 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
VARSP26640 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.94■□□□□ 0.78
VARSP26640 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
VARSP26640 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VARSP26640 ABHD17AP1-201ENST00000358206 933 ntBASIC19.94■□□□□ 0.78
VARSP26640 AL355802.2-201ENST00000402069 882 ntBASIC19.94■□□□□ 0.78
VARSP26640 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VARSP26640 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VARSP26640 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.94■□□□□ 0.78
VARSP26640 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.94■□□□□ 0.78
VARSP26640 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.94■□□□□ 0.78
VARSP26640 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.94■□□□□ 0.78
VARSP26640 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.94■□□□□ 0.78
VARSP26640 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VARSP26640 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VARSP26640 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
VARSP26640 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
VARSP26640 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
VARSP26640 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
VARSP26640 RBM17P2-201ENST00000616397 1405 ntBASIC19.93■□□□□ 0.78
VARSP26640 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
VARSP26640 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.93■□□□□ 0.78
VARSP26640 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VARSP26640 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
VARSP26640 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VARSP26640 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
VARSP26640 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VARSP26640 AC073314.1-201ENST00000568729 2216 ntBASIC19.93■□□□□ 0.78
VARSP26640 GPX1P1-201ENST00000388829 606 ntBASIC19.93■□□□□ 0.78
VARSP26640 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.93■□□□□ 0.78
VARSP26640 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.93■□□□□ 0.78
VARSP26640 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VARSP26640 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.93■□□□□ 0.78
VARSP26640 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.93■□□□□ 0.78
VARSP26640 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VARSP26640 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
VARSP26640 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.93■□□□□ 0.78
VARSP26640 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
VARSP26640 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VARSP26640 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VARSP26640 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
VARSP26640 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VARSP26640 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
VARSP26640 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VARSP26640 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
VARSP26640 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VARSP26640 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VARSP26640 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VARSP26640 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.92■□□□□ 0.78
VARSP26640 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.92■□□□□ 0.78
VARSP26640 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.92■□□□□ 0.78
VARSP26640 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
VARSP26640 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.92■□□□□ 0.78
VARSP26640 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VARSP26640 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VARSP26640 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
VARSP26640 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.92■□□□□ 0.78
VARSP26640 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VARSP26640 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
VARSP26640 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.92■□□□□ 0.78
VARSP26640 AC011484.1-201ENST00000377652 1995 ntBASIC19.92■□□□□ 0.78
VARSP26640 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.92■□□□□ 0.78
VARSP26640 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
VARSP26640 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
VARSP26640 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
VARSP26640 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VARSP26640 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VARSP26640 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
VARSP26640 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VARSP26640 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VARSP26640 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
VARSP26640 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
VARSP26640 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms