Protein–RNA interactions for Protein: P20309

CHRM3, Muscarinic acetylcholine receptor M3, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM3P20309 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHRM3P20309 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.24■□□□□ 0.83
CHRM3P20309 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.24■□□□□ 0.83
CHRM3P20309 AC022517.1-201ENST00000592429 346 ntBASIC20.24■□□□□ 0.83
CHRM3P20309 AC011767.1-201ENST00000617410 1153 ntBASIC20.24■□□□□ 0.83
CHRM3P20309 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CHRM3P20309 AC013268.1-206ENST00000638368 961 ntBASIC20.24■□□□□ 0.83
CHRM3P20309 AC112229.1-201ENST00000639295 961 ntBASIC20.24■□□□□ 0.83
CHRM3P20309 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CHRM3P20309 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHRM3P20309 AP005212.1-201ENST00000581547 1997 ntBASIC20.24■□□□□ 0.83
CHRM3P20309 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHRM3P20309 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHRM3P20309 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHRM3P20309 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CHRM3P20309 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.24■□□□□ 0.83
CHRM3P20309 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CHRM3P20309 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHRM3P20309 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHRM3P20309 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHRM3P20309 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.23■□□□□ 0.83
CHRM3P20309 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CHRM3P20309 AL121603.2-201ENST00000557373 2117 ntBASIC20.23■□□□□ 0.83
CHRM3P20309 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHRM3P20309 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CHRM3P20309 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHRM3P20309 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.23■□□□□ 0.83
CHRM3P20309 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHRM3P20309 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.23■□□□□ 0.83
CHRM3P20309 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.23■□□□□ 0.83
CHRM3P20309 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHRM3P20309 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
CHRM3P20309 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CHRM3P20309 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CHRM3P20309 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHRM3P20309 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHRM3P20309 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.23■□□□□ 0.83
CHRM3P20309 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
CHRM3P20309 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHRM3P20309 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CHRM3P20309 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHRM3P20309 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CHRM3P20309 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHRM3P20309 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHRM3P20309 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.23■□□□□ 0.83
CHRM3P20309 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHRM3P20309 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHRM3P20309 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHRM3P20309 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHRM3P20309 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHRM3P20309 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CHRM3P20309 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.22■□□□□ 0.83
CHRM3P20309 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.22■□□□□ 0.83
CHRM3P20309 BID-214ENST00000617586 542 ntTSL 5 BASIC20.22■□□□□ 0.83
CHRM3P20309 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.22■□□□□ 0.83
CHRM3P20309 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHRM3P20309 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHRM3P20309 GABARAPL3-202ENST00000624044 1851 ntBASIC20.22■□□□□ 0.83
CHRM3P20309 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CHRM3P20309 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CHRM3P20309 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHRM3P20309 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
CHRM3P20309 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHRM3P20309 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHRM3P20309 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHRM3P20309 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHRM3P20309 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHRM3P20309 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHRM3P20309 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.21■□□□□ 0.83
CHRM3P20309 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.21■□□□□ 0.83
CHRM3P20309 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHRM3P20309 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.21■□□□□ 0.83
CHRM3P20309 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.21■□□□□ 0.83
CHRM3P20309 MIR2861-201ENST00000636310 90 ntBASIC20.21■□□□□ 0.83
CHRM3P20309 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.21■□□□□ 0.83
CHRM3P20309 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.21■□□□□ 0.83
CHRM3P20309 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHRM3P20309 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.21■□□□□ 0.83
CHRM3P20309 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHRM3P20309 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHRM3P20309 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHRM3P20309 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.21■□□□□ 0.83
CHRM3P20309 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHRM3P20309 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CHRM3P20309 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHRM3P20309 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
CHRM3P20309 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.83
CHRM3P20309 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
CHRM3P20309 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHRM3P20309 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHRM3P20309 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.2■□□□□ 0.82
CHRM3P20309 AC020907.5-201ENST00000624372 1936 ntBASIC20.2■□□□□ 0.82
CHRM3P20309 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHRM3P20309 DUX4L16-201ENST00000555130 1264 ntBASIC20.2■□□□□ 0.82
CHRM3P20309 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.2■□□□□ 0.82
CHRM3P20309 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.2■□□□□ 0.82
CHRM3P20309 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CHRM3P20309 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CHRM3P20309 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHRM3P20309 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms