Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 AC125437.2-201ENST00000625180 2167 ntBASIC17.86■□□□□ 0.45
ATF1P18846 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.86■□□□□ 0.45
ATF1P18846 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ATF1P18846 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATF1P18846 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATF1P18846 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATF1P18846 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATF1P18846 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATF1P18846 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATF1P18846 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.85■□□□□ 0.45
ATF1P18846 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATF1P18846 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.85■□□□□ 0.45
ATF1P18846 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.85■□□□□ 0.45
ATF1P18846 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.85■□□□□ 0.45
ATF1P18846 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ATF1P18846 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.85■□□□□ 0.45
ATF1P18846 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ATF1P18846 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.85■□□□□ 0.45
ATF1P18846 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATF1P18846 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.85■□□□□ 0.45
ATF1P18846 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATF1P18846 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATF1P18846 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.84■□□□□ 0.45
ATF1P18846 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATF1P18846 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATF1P18846 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
ATF1P18846 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.84■□□□□ 0.45
ATF1P18846 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATF1P18846 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATF1P18846 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATF1P18846 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.84■□□□□ 0.45
ATF1P18846 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
ATF1P18846 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.84■□□□□ 0.45
ATF1P18846 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.84■□□□□ 0.45
ATF1P18846 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
ATF1P18846 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATF1P18846 AC061975.6-201ENST00000579045 1553 ntBASIC17.84■□□□□ 0.45
ATF1P18846 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATF1P18846 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
ATF1P18846 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATF1P18846 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.84■□□□□ 0.45
ATF1P18846 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.84■□□□□ 0.45
ATF1P18846 AL358852.1-201ENST00000623174 1268 ntBASIC17.84■□□□□ 0.45
ATF1P18846 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATF1P18846 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
ATF1P18846 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATF1P18846 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATF1P18846 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATF1P18846 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.84■□□□□ 0.45
ATF1P18846 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATF1P18846 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATF1P18846 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ATF1P18846 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.83■□□□□ 0.45
ATF1P18846 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ATF1P18846 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ATF1P18846 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATF1P18846 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATF1P18846 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.83■□□□□ 0.44
ATF1P18846 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.83■□□□□ 0.44
ATF1P18846 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ATF1P18846 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ATF1P18846 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.83■□□□□ 0.44
ATF1P18846 AL139246.5-201ENST00000606645 996 ntBASIC17.83■□□□□ 0.44
ATF1P18846 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.83■□□□□ 0.44
ATF1P18846 AL158211.5-201ENST00000623583 2518 ntBASIC17.83■□□□□ 0.44
ATF1P18846 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATF1P18846 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
ATF1P18846 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATF1P18846 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATF1P18846 AC092720.2-201ENST00000602388 1665 ntBASIC17.83■□□□□ 0.44
ATF1P18846 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ATF1P18846 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
ATF1P18846 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATF1P18846 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATF1P18846 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
ATF1P18846 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATF1P18846 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATF1P18846 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATF1P18846 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
ATF1P18846 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATF1P18846 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATF1P18846 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATF1P18846 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.82■□□□□ 0.44
ATF1P18846 AC008175.2-201ENST00000612840 297 ntBASIC17.82■□□□□ 0.44
ATF1P18846 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.82■□□□□ 0.44
ATF1P18846 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
ATF1P18846 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATF1P18846 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATF1P18846 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATF1P18846 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
ATF1P18846 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATF1P18846 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ATF1P18846 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.81■□□□□ 0.44
ATF1P18846 AC142381.2-201ENST00000566120 298 ntBASIC17.81■□□□□ 0.44
ATF1P18846 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.81■□□□□ 0.44
ATF1P18846 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATF1P18846 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
ATF1P18846 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATF1P18846 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATF1P18846 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms