Protein–RNA interactions for Protein: P18505

GABRB1, Gamma-aminobutyric acid receptor subunit beta-1, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB1P18505 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.36■□□□□ 0.53
GABRB1P18505 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.36■□□□□ 0.53
GABRB1P18505 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GABRB1P18505 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GABRB1P18505 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GABRB1P18505 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GABRB1P18505 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.36■□□□□ 0.53
GABRB1P18505 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.36■□□□□ 0.53
GABRB1P18505 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.36■□□□□ 0.53
GABRB1P18505 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.36■□□□□ 0.53
GABRB1P18505 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GABRB1P18505 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
GABRB1P18505 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.35■□□□□ 0.53
GABRB1P18505 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GABRB1P18505 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GABRB1P18505 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GABRB1P18505 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.35■□□□□ 0.53
GABRB1P18505 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GABRB1P18505 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GABRB1P18505 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GABRB1P18505 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
GABRB1P18505 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GABRB1P18505 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.35■□□□□ 0.53
GABRB1P18505 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.35■□□□□ 0.53
GABRB1P18505 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.35■□□□□ 0.53
GABRB1P18505 MIR4767-201ENST00000582827 78 ntBASIC18.35■□□□□ 0.53
GABRB1P18505 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.35■□□□□ 0.53
GABRB1P18505 AL035685.1-201ENST00000636663 812 ntBASIC18.35■□□□□ 0.53
GABRB1P18505 AC105233.4-201ENST00000642045 216 ntBASIC18.35■□□□□ 0.53
GABRB1P18505 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.35■□□□□ 0.53
GABRB1P18505 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GABRB1P18505 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
GABRB1P18505 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
GABRB1P18505 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GABRB1P18505 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.35■□□□□ 0.53
GABRB1P18505 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.35■□□□□ 0.53
GABRB1P18505 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GABRB1P18505 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GABRB1P18505 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GABRB1P18505 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
GABRB1P18505 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GABRB1P18505 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GABRB1P18505 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GABRB1P18505 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
GABRB1P18505 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GABRB1P18505 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GABRB1P18505 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GABRB1P18505 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.34■□□□□ 0.53
GABRB1P18505 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GABRB1P18505 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.34■□□□□ 0.53
GABRB1P18505 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.34■□□□□ 0.53
GABRB1P18505 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GABRB1P18505 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GABRB1P18505 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.34■□□□□ 0.53
GABRB1P18505 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
GABRB1P18505 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.34■□□□□ 0.53
GABRB1P18505 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.34■□□□□ 0.53
GABRB1P18505 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
GABRB1P18505 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GABRB1P18505 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.34■□□□□ 0.53
GABRB1P18505 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GABRB1P18505 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GABRB1P18505 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.34■□□□□ 0.53
GABRB1P18505 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GABRB1P18505 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.34■□□□□ 0.53
GABRB1P18505 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
GABRB1P18505 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GABRB1P18505 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.34■□□□□ 0.53
GABRB1P18505 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
GABRB1P18505 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
GABRB1P18505 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
GABRB1P18505 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
GABRB1P18505 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
GABRB1P18505 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
GABRB1P18505 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
GABRB1P18505 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
GABRB1P18505 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.33■□□□□ 0.52
GABRB1P18505 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.33■□□□□ 0.52
GABRB1P18505 AC126544.1-201ENST00000580842 1059 ntBASIC18.33■□□□□ 0.52
GABRB1P18505 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GABRB1P18505 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GABRB1P18505 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
GABRB1P18505 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GABRB1P18505 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.33■□□□□ 0.52
GABRB1P18505 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GABRB1P18505 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
GABRB1P18505 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GABRB1P18505 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
GABRB1P18505 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
GABRB1P18505 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.32■□□□□ 0.52
GABRB1P18505 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GABRB1P18505 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GABRB1P18505 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GABRB1P18505 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.32■□□□□ 0.52
GABRB1P18505 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GABRB1P18505 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GABRB1P18505 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GABRB1P18505 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GABRB1P18505 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
GABRB1P18505 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms