Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 AC022517.1-201ENST00000592429 346 ntBASIC21.27■■□□□ 1
TCF4P15884 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.27■■□□□ 1
TCF4P15884 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.27■■□□□ 1
TCF4P15884 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.27■■□□□ 1
TCF4P15884 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.27■■□□□ 1
TCF4P15884 AFG3L1P-217ENST00000557444 2447 ntBASIC21.27■■□□□ 1
TCF4P15884 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
TCF4P15884 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
TCF4P15884 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TCF4P15884 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TCF4P15884 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TCF4P15884 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TCF4P15884 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.26■□□□□ 0.99
TCF4P15884 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
TCF4P15884 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TCF4P15884 AL591742.1-201ENST00000604433 565 ntBASIC21.26■□□□□ 0.99
TCF4P15884 AC092437.1-201ENST00000624794 1048 ntBASIC21.26■□□□□ 0.99
TCF4P15884 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TCF4P15884 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TCF4P15884 KRT8P36-201ENST00000489121 1440 ntBASIC21.26■□□□□ 0.99
TCF4P15884 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.26■□□□□ 0.99
TCF4P15884 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TCF4P15884 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TCF4P15884 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TCF4P15884 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TCF4P15884 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TCF4P15884 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.26■□□□□ 0.99
TCF4P15884 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.26■□□□□ 0.99
TCF4P15884 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TCF4P15884 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.25■□□□□ 0.99
TCF4P15884 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
TCF4P15884 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TCF4P15884 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.25■□□□□ 0.99
TCF4P15884 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
TCF4P15884 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TCF4P15884 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TCF4P15884 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.25■□□□□ 0.99
TCF4P15884 CDV3P1-201ENST00000471403 739 ntBASIC21.25■□□□□ 0.99
TCF4P15884 AC007322.4-201ENST00000509611 723 ntBASIC21.25■□□□□ 0.99
TCF4P15884 IKBKGP1-201ENST00000612193 1073 ntBASIC21.25■□□□□ 0.99
TCF4P15884 AC013268.1-206ENST00000638368 961 ntBASIC21.25■□□□□ 0.99
TCF4P15884 AC112229.1-201ENST00000639295 961 ntBASIC21.25■□□□□ 0.99
TCF4P15884 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TCF4P15884 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.25■□□□□ 0.99
TCF4P15884 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.25■□□□□ 0.99
TCF4P15884 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TCF4P15884 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.25■□□□□ 0.99
TCF4P15884 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TCF4P15884 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.25■□□□□ 0.99
TCF4P15884 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TCF4P15884 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TCF4P15884 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TCF4P15884 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TCF4P15884 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TCF4P15884 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
TCF4P15884 AC068338.2-201ENST00000563278 1430 ntBASIC21.24■□□□□ 0.99
TCF4P15884 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TCF4P15884 MIR935-201ENST00000401179 91 ntBASIC21.24■□□□□ 0.99
TCF4P15884 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TCF4P15884 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.24■□□□□ 0.99
TCF4P15884 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.24■□□□□ 0.99
TCF4P15884 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
TCF4P15884 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.24■□□□□ 0.99
TCF4P15884 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TCF4P15884 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TCF4P15884 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TCF4P15884 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TCF4P15884 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
TCF4P15884 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.24■□□□□ 0.99
TCF4P15884 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TCF4P15884 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.24■□□□□ 0.99
TCF4P15884 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.23■□□□□ 0.99
TCF4P15884 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TCF4P15884 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TCF4P15884 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TCF4P15884 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TCF4P15884 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TCF4P15884 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.23■□□□□ 0.99
TCF4P15884 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
TCF4P15884 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
TCF4P15884 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.23■□□□□ 0.99
TCF4P15884 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.23■□□□□ 0.99
TCF4P15884 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.23■□□□□ 0.99
TCF4P15884 FAM21FP-204ENST00000608637 956 ntBASIC21.23■□□□□ 0.99
TCF4P15884 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TCF4P15884 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.23■□□□□ 0.99
TCF4P15884 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TCF4P15884 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TCF4P15884 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TCF4P15884 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TCF4P15884 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
TCF4P15884 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.23■□□□□ 0.99
TCF4P15884 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.22■□□□□ 0.99
TCF4P15884 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TCF4P15884 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.22■□□□□ 0.99
TCF4P15884 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TCF4P15884 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TCF4P15884 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TCF4P15884 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.22■□□□□ 0.99
TCF4P15884 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms