Protein–RNA interactions for Protein: P12036

NEFH, Neurofilament heavy polypeptide, humanhuman

Predictions only

Length 1,026 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFHP12036 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.59■□□□□ 0.89
NEFHP12036 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NEFHP12036 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NEFHP12036 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.59■□□□□ 0.89
NEFHP12036 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
NEFHP12036 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.59■□□□□ 0.89
NEFHP12036 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.59■□□□□ 0.89
NEFHP12036 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NEFHP12036 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
NEFHP12036 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.58■□□□□ 0.89
NEFHP12036 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NEFHP12036 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NEFHP12036 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NEFHP12036 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.58■□□□□ 0.89
NEFHP12036 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NEFHP12036 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NEFHP12036 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NEFHP12036 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.58■□□□□ 0.89
NEFHP12036 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
NEFHP12036 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.58■□□□□ 0.89
NEFHP12036 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.58■□□□□ 0.89
NEFHP12036 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NEFHP12036 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.58■□□□□ 0.88
NEFHP12036 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NEFHP12036 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NEFHP12036 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
NEFHP12036 PKD1P1-201ENST00000458669 6805 ntBASIC20.58■□□□□ 0.88
NEFHP12036 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
NEFHP12036 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NEFHP12036 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.58■□□□□ 0.88
NEFHP12036 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NEFHP12036 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NEFHP12036 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
NEFHP12036 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NEFHP12036 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NEFHP12036 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
NEFHP12036 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NEFHP12036 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NEFHP12036 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NEFHP12036 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.57■□□□□ 0.88
NEFHP12036 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NEFHP12036 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
NEFHP12036 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.57■□□□□ 0.88
NEFHP12036 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NEFHP12036 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.57■□□□□ 0.88
NEFHP12036 MIR4466-201ENST00000606121 54 ntBASIC20.57■□□□□ 0.88
NEFHP12036 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NEFHP12036 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NEFHP12036 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NEFHP12036 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NEFHP12036 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.57■□□□□ 0.88
NEFHP12036 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.57■□□□□ 0.88
NEFHP12036 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NEFHP12036 AC087289.5-201ENST00000586076 3175 ntBASIC20.56■□□□□ 0.88
NEFHP12036 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEFHP12036 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEFHP12036 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NEFHP12036 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NEFHP12036 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NEFHP12036 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NEFHP12036 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
NEFHP12036 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEFHP12036 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEFHP12036 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NEFHP12036 SLC47A1P1-202ENST00000449666 945 ntBASIC20.56■□□□□ 0.88
NEFHP12036 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.56■□□□□ 0.88
NEFHP12036 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.56■□□□□ 0.88
NEFHP12036 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
NEFHP12036 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.56■□□□□ 0.88
NEFHP12036 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
NEFHP12036 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEFHP12036 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NEFHP12036 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEFHP12036 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
NEFHP12036 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEFHP12036 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEFHP12036 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NEFHP12036 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.55■□□□□ 0.88
NEFHP12036 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEFHP12036 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEFHP12036 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEFHP12036 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NEFHP12036 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEFHP12036 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
NEFHP12036 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NEFHP12036 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NEFHP12036 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.55■□□□□ 0.88
NEFHP12036 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.55■□□□□ 0.88
NEFHP12036 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEFHP12036 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NEFHP12036 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
NEFHP12036 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NEFHP12036 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NEFHP12036 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NEFHP12036 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEFHP12036 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.55■□□□□ 0.88
NEFHP12036 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.54■□□□□ 0.88
NEFHP12036 AL512408.1-201ENST00000569378 2000 ntBASIC20.54■□□□□ 0.88
NEFHP12036 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NEFHP12036 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms