Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
LTN1O94822 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
LTN1O94822 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
LTN1O94822 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
LTN1O94822 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
LTN1O94822 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
LTN1O94822 AC087499.1-201ENST00000418141 1075 ntBASIC27.27■■□□□ 1.96
LTN1O94822 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
LTN1O94822 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC27.27■■□□□ 1.96
LTN1O94822 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
LTN1O94822 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC27.27■■□□□ 1.96
LTN1O94822 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
LTN1O94822 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC27.27■■□□□ 1.96
LTN1O94822 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
LTN1O94822 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
LTN1O94822 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
LTN1O94822 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC27.27■■□□□ 1.96
LTN1O94822 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC27.27■■□□□ 1.96
LTN1O94822 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC27.27■■□□□ 1.96
LTN1O94822 PPOX-219ENST00000544598 813 ntTSL 2 BASIC27.27■■□□□ 1.96
LTN1O94822 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
LTN1O94822 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC27.27■■□□□ 1.96
LTN1O94822 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
LTN1O94822 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
LTN1O94822 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC27.27■■□□□ 1.96
LTN1O94822 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
LTN1O94822 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC27.27■■□□□ 1.96
LTN1O94822 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
LTN1O94822 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
LTN1O94822 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
LTN1O94822 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC27.26■■□□□ 1.95
LTN1O94822 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC27.26■■□□□ 1.95
LTN1O94822 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC27.26■■□□□ 1.95
LTN1O94822 AL121906.2-201ENST00000621597 723 ntBASIC27.26■■□□□ 1.95
LTN1O94822 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
LTN1O94822 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
LTN1O94822 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
LTN1O94822 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC27.25■■□□□ 1.95
LTN1O94822 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
LTN1O94822 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
LTN1O94822 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
LTN1O94822 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC27.25■■□□□ 1.95
LTN1O94822 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC27.25■■□□□ 1.95
LTN1O94822 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
LTN1O94822 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC27.25■■□□□ 1.95
LTN1O94822 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
LTN1O94822 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
LTN1O94822 AL135905.2-201ENST00000584934 1404 ntBASIC27.25■■□□□ 1.95
LTN1O94822 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
LTN1O94822 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC27.25■■□□□ 1.95
LTN1O94822 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC27.25■■□□□ 1.95
LTN1O94822 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
LTN1O94822 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC27.25■■□□□ 1.95
LTN1O94822 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC27.25■■□□□ 1.95
LTN1O94822 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC27.25■■□□□ 1.95
LTN1O94822 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC27.25■■□□□ 1.95
LTN1O94822 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
LTN1O94822 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC27.24■■□□□ 1.95
LTN1O94822 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
LTN1O94822 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
LTN1O94822 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
LTN1O94822 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
LTN1O94822 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC27.24■■□□□ 1.95
LTN1O94822 DYM-203ENST00000442713 2147 ntTSL 2 BASIC27.24■■□□□ 1.95
LTN1O94822 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC27.24■■□□□ 1.95
LTN1O94822 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC27.24■■□□□ 1.95
LTN1O94822 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC27.24■■□□□ 1.95
LTN1O94822 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
LTN1O94822 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
LTN1O94822 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
LTN1O94822 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC27.23■■□□□ 1.95
LTN1O94822 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC27.23■■□□□ 1.95
LTN1O94822 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
LTN1O94822 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
LTN1O94822 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
LTN1O94822 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC27.23■■□□□ 1.95
LTN1O94822 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC27.23■■□□□ 1.95
LTN1O94822 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC27.23■■□□□ 1.95
LTN1O94822 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
LTN1O94822 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
LTN1O94822 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC27.23■■□□□ 1.95
LTN1O94822 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
LTN1O94822 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
LTN1O94822 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC27.22■■□□□ 1.95
LTN1O94822 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
LTN1O94822 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC27.22■■□□□ 1.95
LTN1O94822 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC27.22■■□□□ 1.95
LTN1O94822 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
LTN1O94822 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC27.22■■□□□ 1.95
LTN1O94822 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
LTN1O94822 AC211429.1-201ENST00000415277 523 ntBASIC27.22■■□□□ 1.95
LTN1O94822 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC27.22■■□□□ 1.95
LTN1O94822 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
LTN1O94822 AC012306.2-201ENST00000609350 630 ntBASIC27.22■■□□□ 1.95
LTN1O94822 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
LTN1O94822 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC27.22■■□□□ 1.95
LTN1O94822 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
LTN1O94822 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
LTN1O94822 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
LTN1O94822 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms