Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
BEST1O76090 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
BEST1O76090 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
BEST1O76090 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
BEST1O76090 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.44■■□□□ 1.02
BEST1O76090 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
BEST1O76090 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
BEST1O76090 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.44■■□□□ 1.02
BEST1O76090 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
BEST1O76090 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
BEST1O76090 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
BEST1O76090 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
BEST1O76090 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
BEST1O76090 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.43■■□□□ 1.02
BEST1O76090 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
BEST1O76090 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
BEST1O76090 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
BEST1O76090 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
BEST1O76090 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.43■■□□□ 1.02
BEST1O76090 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.43■■□□□ 1.02
BEST1O76090 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
BEST1O76090 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.43■■□□□ 1.02
BEST1O76090 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
BEST1O76090 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.43■■□□□ 1.02
BEST1O76090 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
BEST1O76090 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
BEST1O76090 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
BEST1O76090 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
BEST1O76090 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
BEST1O76090 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.42■■□□□ 1.02
BEST1O76090 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.42■■□□□ 1.02
BEST1O76090 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
BEST1O76090 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
BEST1O76090 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.42■■□□□ 1.02
BEST1O76090 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.42■■□□□ 1.02
BEST1O76090 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.42■■□□□ 1.02
BEST1O76090 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.42■■□□□ 1.02
BEST1O76090 TSPY20P-201ENST00000450910 630 ntBASIC21.42■■□□□ 1.02
BEST1O76090 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.42■■□□□ 1.02
BEST1O76090 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
BEST1O76090 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.42■■□□□ 1.02
BEST1O76090 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
BEST1O76090 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
BEST1O76090 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.42■■□□□ 1.02
BEST1O76090 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
BEST1O76090 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
BEST1O76090 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
BEST1O76090 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.41■■□□□ 1.02
BEST1O76090 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
BEST1O76090 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
BEST1O76090 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
BEST1O76090 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
BEST1O76090 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
BEST1O76090 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
BEST1O76090 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
BEST1O76090 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
BEST1O76090 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
BEST1O76090 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
BEST1O76090 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
BEST1O76090 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
BEST1O76090 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
BEST1O76090 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.41■■□□□ 1.02
BEST1O76090 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
BEST1O76090 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
BEST1O76090 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
BEST1O76090 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.41■■□□□ 1.02
BEST1O76090 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
BEST1O76090 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.41■■□□□ 1.02
BEST1O76090 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
BEST1O76090 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
BEST1O76090 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
BEST1O76090 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.4■■□□□ 1.02
BEST1O76090 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
BEST1O76090 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.4■■□□□ 1.02
BEST1O76090 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
BEST1O76090 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
BEST1O76090 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
BEST1O76090 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.4■■□□□ 1.02
BEST1O76090 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
BEST1O76090 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
BEST1O76090 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
BEST1O76090 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
BEST1O76090 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.4■■□□□ 1.02
BEST1O76090 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.4■■□□□ 1.02
BEST1O76090 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.4■■□□□ 1.02
BEST1O76090 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
BEST1O76090 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
BEST1O76090 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
BEST1O76090 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
BEST1O76090 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
BEST1O76090 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.4■■□□□ 1.02
BEST1O76090 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.4■■□□□ 1.02
BEST1O76090 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.4■■□□□ 1.02
BEST1O76090 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
BEST1O76090 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
BEST1O76090 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
BEST1O76090 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
BEST1O76090 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.39■■□□□ 1.01
BEST1O76090 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
BEST1O76090 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms