Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH16O75309 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDH16O75309 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDH16O75309 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH16O75309 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH16O75309 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH16O75309 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH16O75309 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.54■□□□□ 0.88
CDH16O75309 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.54■□□□□ 0.88
CDH16O75309 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.54■□□□□ 0.88
CDH16O75309 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH16O75309 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CDH16O75309 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CDH16O75309 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH16O75309 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH16O75309 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDH16O75309 AL139246.5-201ENST00000606645 996 ntBASIC20.54■□□□□ 0.88
CDH16O75309 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.54■□□□□ 0.88
CDH16O75309 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH16O75309 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
CDH16O75309 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH16O75309 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH16O75309 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH16O75309 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH16O75309 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH16O75309 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CDH16O75309 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH16O75309 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH16O75309 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CDH16O75309 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH16O75309 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.53■□□□□ 0.88
CDH16O75309 MIR2861-201ENST00000636310 90 ntBASIC20.53■□□□□ 0.88
CDH16O75309 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH16O75309 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDH16O75309 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CDH16O75309 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH16O75309 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.53■□□□□ 0.88
CDH16O75309 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.53■□□□□ 0.88
CDH16O75309 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH16O75309 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH16O75309 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDH16O75309 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDH16O75309 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH16O75309 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDH16O75309 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH16O75309 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDH16O75309 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDH16O75309 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
CDH16O75309 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.52■□□□□ 0.88
CDH16O75309 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDH16O75309 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDH16O75309 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.52■□□□□ 0.88
CDH16O75309 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.52■□□□□ 0.88
CDH16O75309 POU5F1P4-201ENST00000413175 1085 ntBASIC20.52■□□□□ 0.88
CDH16O75309 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.52■□□□□ 0.88
CDH16O75309 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDH16O75309 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDH16O75309 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.51■□□□□ 0.87
CDH16O75309 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDH16O75309 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDH16O75309 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDH16O75309 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDH16O75309 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CDH16O75309 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.51■□□□□ 0.87
CDH16O75309 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDH16O75309 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.51■□□□□ 0.87
CDH16O75309 RARRES2P11-201ENST00000635158 484 ntBASIC20.51■□□□□ 0.87
CDH16O75309 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDH16O75309 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.51■□□□□ 0.87
CDH16O75309 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDH16O75309 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDH16O75309 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH16O75309 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH16O75309 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.5■□□□□ 0.87
CDH16O75309 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH16O75309 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.5■□□□□ 0.87
CDH16O75309 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH16O75309 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.5■□□□□ 0.87
CDH16O75309 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH16O75309 AC096631.2-201ENST00000436136 790 ntBASIC20.5■□□□□ 0.87
CDH16O75309 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.5■□□□□ 0.87
CDH16O75309 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.5■□□□□ 0.87
CDH16O75309 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDH16O75309 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CDH16O75309 AC008175.2-201ENST00000612840 297 ntBASIC20.5■□□□□ 0.87
CDH16O75309 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CDH16O75309 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH16O75309 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.5■□□□□ 0.87
CDH16O75309 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH16O75309 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH16O75309 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDH16O75309 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CDH16O75309 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CDH16O75309 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CDH16O75309 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDH16O75309 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDH16O75309 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.49■□□□□ 0.87
CDH16O75309 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDH16O75309 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.49■□□□□ 0.87
CDH16O75309 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms