Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.24■□□□□ 0.67
URB1O60287 LINC01568-207ENST00000641790 1380 ntBASIC19.24■□□□□ 0.67
URB1O60287 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
URB1O60287 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
URB1O60287 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
URB1O60287 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
URB1O60287 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.24■□□□□ 0.67
URB1O60287 DUX4L26-201ENST00000489078 1255 ntBASIC19.24■□□□□ 0.67
URB1O60287 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.24■□□□□ 0.67
URB1O60287 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.24■□□□□ 0.67
URB1O60287 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
URB1O60287 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
URB1O60287 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
URB1O60287 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
URB1O60287 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
URB1O60287 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
URB1O60287 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.23■□□□□ 0.67
URB1O60287 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.23■□□□□ 0.67
URB1O60287 AF186192.3-201ENST00000583427 947 ntBASIC19.23■□□□□ 0.67
URB1O60287 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.23■□□□□ 0.67
URB1O60287 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
URB1O60287 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
URB1O60287 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
URB1O60287 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.23■□□□□ 0.67
URB1O60287 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.23■□□□□ 0.67
URB1O60287 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.23■□□□□ 0.67
URB1O60287 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.23■□□□□ 0.67
URB1O60287 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.23■□□□□ 0.67
URB1O60287 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
URB1O60287 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
URB1O60287 AC079598.2-202ENST00000546624 1451 ntBASIC19.23■□□□□ 0.67
URB1O60287 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
URB1O60287 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
URB1O60287 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
URB1O60287 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
URB1O60287 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
URB1O60287 AL031963.3-201ENST00000606441 850 ntBASIC19.22■□□□□ 0.67
URB1O60287 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
URB1O60287 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
URB1O60287 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
URB1O60287 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
URB1O60287 AL353807.1-201ENST00000427475 662 ntBASIC19.22■□□□□ 0.67
URB1O60287 TPM4P1-201ENST00000436100 807 ntBASIC19.22■□□□□ 0.67
URB1O60287 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.22■□□□□ 0.67
URB1O60287 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.22■□□□□ 0.67
URB1O60287 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
URB1O60287 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.21■□□□□ 0.67
URB1O60287 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.21■□□□□ 0.67
URB1O60287 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
URB1O60287 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
URB1O60287 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.21■□□□□ 0.67
URB1O60287 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
URB1O60287 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.21■□□□□ 0.67
URB1O60287 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
URB1O60287 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.21■□□□□ 0.67
URB1O60287 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
URB1O60287 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
URB1O60287 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
URB1O60287 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
URB1O60287 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.21■□□□□ 0.67
URB1O60287 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.21■□□□□ 0.67
URB1O60287 AC073195.1-201ENST00000607241 877 ntBASIC19.21■□□□□ 0.67
URB1O60287 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
URB1O60287 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
URB1O60287 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
URB1O60287 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
URB1O60287 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
URB1O60287 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
URB1O60287 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.2■□□□□ 0.66
URB1O60287 TERF1P1-201ENST00000311003 1181 ntBASIC19.2■□□□□ 0.66
URB1O60287 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
URB1O60287 AL390955.1-201ENST00000428694 934 ntBASIC19.2■□□□□ 0.66
URB1O60287 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
URB1O60287 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.2■□□□□ 0.66
URB1O60287 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
URB1O60287 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
URB1O60287 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
URB1O60287 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
URB1O60287 AC139530.1-201ENST00000575312 1977 ntBASIC19.2■□□□□ 0.66
URB1O60287 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
URB1O60287 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
URB1O60287 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.2■□□□□ 0.66
URB1O60287 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
URB1O60287 RBM17P1-201ENST00000453646 1190 ntBASIC19.2■□□□□ 0.66
URB1O60287 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.2■□□□□ 0.66
URB1O60287 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.2■□□□□ 0.66
URB1O60287 WWOX-216ENST00000569818 525 ntBASIC19.2■□□□□ 0.66
URB1O60287 AC006557.6-201ENST00000623071 864 ntBASIC19.2■□□□□ 0.66
URB1O60287 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
URB1O60287 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.19■□□□□ 0.66
URB1O60287 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
URB1O60287 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
URB1O60287 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.19■□□□□ 0.66
URB1O60287 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.19■□□□□ 0.66
URB1O60287 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.19■□□□□ 0.66
URB1O60287 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
URB1O60287 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.19■□□□□ 0.66
URB1O60287 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.19■□□□□ 0.66
URB1O60287 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
URB1O60287 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms