Protein–RNA interactions for Protein: O00458

IFRD1, Interferon-related developmental regulator 1, humanhuman

Predicted RBP Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1O00458 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
IFRD1O00458 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
IFRD1O00458 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
IFRD1O00458 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.1■□□□□ 0.81
IFRD1O00458 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
IFRD1O00458 ID1-201ENST00000376105 1233 ntBASIC20.1■□□□□ 0.81
IFRD1O00458 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.1■□□□□ 0.81
IFRD1O00458 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.1■□□□□ 0.81
IFRD1O00458 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.1■□□□□ 0.81
IFRD1O00458 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.1■□□□□ 0.81
IFRD1O00458 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.1■□□□□ 0.81
IFRD1O00458 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
IFRD1O00458 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.1■□□□□ 0.81
IFRD1O00458 AL109923.1-201ENST00000618799 583 ntBASIC20.1■□□□□ 0.81
IFRD1O00458 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
IFRD1O00458 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
IFRD1O00458 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
IFRD1O00458 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
IFRD1O00458 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.09■□□□□ 0.81
IFRD1O00458 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
IFRD1O00458 MKRN4P-201ENST00000444706 1521 ntBASIC20.09■□□□□ 0.81
IFRD1O00458 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
IFRD1O00458 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.09■□□□□ 0.81
IFRD1O00458 AC100791.3-201ENST00000617619 330 ntBASIC20.09■□□□□ 0.81
IFRD1O00458 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
IFRD1O00458 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.09■□□□□ 0.81
IFRD1O00458 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
IFRD1O00458 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
IFRD1O00458 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
IFRD1O00458 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
IFRD1O00458 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
IFRD1O00458 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.08■□□□□ 0.81
IFRD1O00458 LINC01006-201ENST00000333319 2292 ntBASIC20.08■□□□□ 0.81
IFRD1O00458 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
IFRD1O00458 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
IFRD1O00458 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.08■□□□□ 0.81
IFRD1O00458 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.08■□□□□ 0.81
IFRD1O00458 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
IFRD1O00458 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
IFRD1O00458 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
IFRD1O00458 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
IFRD1O00458 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
IFRD1O00458 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
IFRD1O00458 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.08■□□□□ 0.8
IFRD1O00458 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
IFRD1O00458 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
IFRD1O00458 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IFRD1O00458 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
IFRD1O00458 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.07■□□□□ 0.8
IFRD1O00458 AC006128.1-201ENST00000624704 1661 ntBASIC20.07■□□□□ 0.8
IFRD1O00458 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
IFRD1O00458 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IFRD1O00458 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IFRD1O00458 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
IFRD1O00458 HLA-L-209ENST00000420110 1011 ntBASIC20.07■□□□□ 0.8
IFRD1O00458 AC093787.1-201ENST00000450396 207 ntBASIC20.07■□□□□ 0.8
IFRD1O00458 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.07■□□□□ 0.8
IFRD1O00458 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IFRD1O00458 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
IFRD1O00458 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
IFRD1O00458 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IFRD1O00458 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IFRD1O00458 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.07■□□□□ 0.8
IFRD1O00458 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
IFRD1O00458 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
IFRD1O00458 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
IFRD1O00458 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IFRD1O00458 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.06■□□□□ 0.8
IFRD1O00458 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
IFRD1O00458 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.06■□□□□ 0.8
IFRD1O00458 TSPY6P-201ENST00000448518 926 ntBASIC20.06■□□□□ 0.8
IFRD1O00458 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
IFRD1O00458 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
IFRD1O00458 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
IFRD1O00458 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
IFRD1O00458 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.06■□□□□ 0.8
IFRD1O00458 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.06■□□□□ 0.8
IFRD1O00458 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.06■□□□□ 0.8
IFRD1O00458 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.06■□□□□ 0.8
IFRD1O00458 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.06■□□□□ 0.8
IFRD1O00458 AC010980.2-201ENST00000587099 1412 ntBASIC20.06■□□□□ 0.8
IFRD1O00458 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
IFRD1O00458 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
IFRD1O00458 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.06■□□□□ 0.8
IFRD1O00458 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IFRD1O00458 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IFRD1O00458 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IFRD1O00458 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IFRD1O00458 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.05■□□□□ 0.8
IFRD1O00458 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
IFRD1O00458 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
IFRD1O00458 GABARAPL3-202ENST00000624044 1851 ntBASIC20.05■□□□□ 0.8
IFRD1O00458 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IFRD1O00458 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.05■□□□□ 0.8
IFRD1O00458 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.05■□□□□ 0.8
IFRD1O00458 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
IFRD1O00458 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IFRD1O00458 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
IFRD1O00458 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
IFRD1O00458 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms