Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TLR4O00206 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TLR4O00206 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TLR4O00206 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
TLR4O00206 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TLR4O00206 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
TLR4O00206 MIR718-201ENST00000390190 70 ntBASIC20.21■□□□□ 0.83
TLR4O00206 PGM5P4-201ENST00000421970 445 ntBASIC20.21■□□□□ 0.83
TLR4O00206 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
TLR4O00206 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.21■□□□□ 0.83
TLR4O00206 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.21■□□□□ 0.83
TLR4O00206 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TLR4O00206 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TLR4O00206 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TLR4O00206 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TLR4O00206 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TLR4O00206 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
TLR4O00206 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.2■□□□□ 0.82
TLR4O00206 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TLR4O00206 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.2■□□□□ 0.82
TLR4O00206 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.2■□□□□ 0.82
TLR4O00206 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
TLR4O00206 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TLR4O00206 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.2■□□□□ 0.82
TLR4O00206 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
TLR4O00206 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TLR4O00206 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TLR4O00206 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TLR4O00206 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.2■□□□□ 0.82
TLR4O00206 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.19■□□□□ 0.82
TLR4O00206 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.19■□□□□ 0.82
TLR4O00206 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TLR4O00206 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
TLR4O00206 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TLR4O00206 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
TLR4O00206 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TLR4O00206 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TLR4O00206 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TLR4O00206 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TLR4O00206 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TLR4O00206 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.19■□□□□ 0.82
TLR4O00206 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.19■□□□□ 0.82
TLR4O00206 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.19■□□□□ 0.82
TLR4O00206 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.19■□□□□ 0.82
TLR4O00206 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.19■□□□□ 0.82
TLR4O00206 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.19■□□□□ 0.82
TLR4O00206 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.19■□□□□ 0.82
TLR4O00206 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.19■□□□□ 0.82
TLR4O00206 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TLR4O00206 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TLR4O00206 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TLR4O00206 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TLR4O00206 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.19■□□□□ 0.82
TLR4O00206 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TLR4O00206 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
TLR4O00206 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TLR4O00206 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.18■□□□□ 0.82
TLR4O00206 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TLR4O00206 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TLR4O00206 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TLR4O00206 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TLR4O00206 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TLR4O00206 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TLR4O00206 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.18■□□□□ 0.82
TLR4O00206 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
TLR4O00206 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.18■□□□□ 0.82
TLR4O00206 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TLR4O00206 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.18■□□□□ 0.82
TLR4O00206 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TLR4O00206 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.18■□□□□ 0.82
TLR4O00206 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
TLR4O00206 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.18■□□□□ 0.82
TLR4O00206 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.18■□□□□ 0.82
TLR4O00206 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TLR4O00206 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TLR4O00206 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TLR4O00206 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TLR4O00206 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TLR4O00206 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TLR4O00206 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TLR4O00206 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TLR4O00206 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TLR4O00206 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TLR4O00206 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TLR4O00206 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TLR4O00206 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
TLR4O00206 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TLR4O00206 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TLR4O00206 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.16■□□□□ 0.82
TLR4O00206 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TLR4O00206 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TLR4O00206 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TLR4O00206 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.16■□□□□ 0.82
TLR4O00206 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TLR4O00206 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TLR4O00206 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
TLR4O00206 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TLR4O00206 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.16■□□□□ 0.82
TLR4O00206 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.16■□□□□ 0.82
TLR4O00206 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms