Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CHKB-CPT1BH3BT56 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CHKB-CPT1BH3BT56 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CHKB-CPT1BH3BT56 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CHKB-CPT1BH3BT56 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CHKB-CPT1BH3BT56 F11R-206ENST00000621309 4770 ntTSL 5 BASIC11.37□□□□□ -0.59
CHKB-CPT1BH3BT56 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
CHKB-CPT1BH3BT56 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CHKB-CPT1BH3BT56 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
CHKB-CPT1BH3BT56 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
CHKB-CPT1BH3BT56 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CHKB-CPT1BH3BT56 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CHKB-CPT1BH3BT56 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC11.37□□□□□ -0.59
CHKB-CPT1BH3BT56 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC11.37□□□□□ -0.59
CHKB-CPT1BH3BT56 TNXA-203ENST00000507684 2038 ntBASIC11.36□□□□□ -0.59
CHKB-CPT1BH3BT56 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CHKB-CPT1BH3BT56 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CHKB-CPT1BH3BT56 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CHKB-CPT1BH3BT56 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
CHKB-CPT1BH3BT56 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CHKB-CPT1BH3BT56 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CHKB-CPT1BH3BT56 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
CHKB-CPT1BH3BT56 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
CHKB-CPT1BH3BT56 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CHKB-CPT1BH3BT56 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CHKB-CPT1BH3BT56 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CHKB-CPT1BH3BT56 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC11.36□□□□□ -0.59
CHKB-CPT1BH3BT56 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
CHKB-CPT1BH3BT56 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
CHKB-CPT1BH3BT56 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC11.36□□□□□ -0.59
CHKB-CPT1BH3BT56 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
CHKB-CPT1BH3BT56 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CHKB-CPT1BH3BT56 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC11.36□□□□□ -0.59
CHKB-CPT1BH3BT56 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
CHKB-CPT1BH3BT56 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
CHKB-CPT1BH3BT56 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
CHKB-CPT1BH3BT56 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CHKB-CPT1BH3BT56 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC11.36□□□□□ -0.59
CHKB-CPT1BH3BT56 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CHKB-CPT1BH3BT56 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC11.36□□□□□ -0.59
CHKB-CPT1BH3BT56 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC11.36□□□□□ -0.59
CHKB-CPT1BH3BT56 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
CHKB-CPT1BH3BT56 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC11.36□□□□□ -0.59
CHKB-CPT1BH3BT56 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
CHKB-CPT1BH3BT56 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CHKB-CPT1BH3BT56 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CHKB-CPT1BH3BT56 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CHKB-CPT1BH3BT56 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CHKB-CPT1BH3BT56 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CHKB-CPT1BH3BT56 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC11.35□□□□□ -0.59
CHKB-CPT1BH3BT56 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
CHKB-CPT1BH3BT56 AC007613.1-201ENST00000572811 2597 ntBASIC11.35□□□□□ -0.59
CHKB-CPT1BH3BT56 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CHKB-CPT1BH3BT56 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CHKB-CPT1BH3BT56 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CHKB-CPT1BH3BT56 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CHKB-CPT1BH3BT56 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC11.35□□□□□ -0.59
CHKB-CPT1BH3BT56 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CHKB-CPT1BH3BT56 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CHKB-CPT1BH3BT56 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC11.35□□□□□ -0.59
CHKB-CPT1BH3BT56 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CHKB-CPT1BH3BT56 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CHKB-CPT1BH3BT56 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
CHKB-CPT1BH3BT56 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CHKB-CPT1BH3BT56 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CHKB-CPT1BH3BT56 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC11.35□□□□□ -0.59
CHKB-CPT1BH3BT56 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CHKB-CPT1BH3BT56 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC11.35□□□□□ -0.59
CHKB-CPT1BH3BT56 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CHKB-CPT1BH3BT56 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CHKB-CPT1BH3BT56 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CHKB-CPT1BH3BT56 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
CHKB-CPT1BH3BT56 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CHKB-CPT1BH3BT56 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
CHKB-CPT1BH3BT56 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CHKB-CPT1BH3BT56 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
CHKB-CPT1BH3BT56 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
CHKB-CPT1BH3BT56 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
CHKB-CPT1BH3BT56 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC11.35□□□□□ -0.59
CHKB-CPT1BH3BT56 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC11.35□□□□□ -0.59
CHKB-CPT1BH3BT56 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CHKB-CPT1BH3BT56 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CHKB-CPT1BH3BT56 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
CHKB-CPT1BH3BT56 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CHKB-CPT1BH3BT56 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC11.34□□□□□ -0.59
CHKB-CPT1BH3BT56 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CHKB-CPT1BH3BT56 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CHKB-CPT1BH3BT56 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CHKB-CPT1BH3BT56 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC11.34□□□□□ -0.59
CHKB-CPT1BH3BT56 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
CHKB-CPT1BH3BT56 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CHKB-CPT1BH3BT56 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CHKB-CPT1BH3BT56 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC11.34□□□□□ -0.59
CHKB-CPT1BH3BT56 AC012313.1-201ENST00000593393 3059 ntBASIC11.34□□□□□ -0.59
CHKB-CPT1BH3BT56 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
CHKB-CPT1BH3BT56 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CHKB-CPT1BH3BT56 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
CHKB-CPT1BH3BT56 RARRES2P7-201ENST00000567349 469 ntBASIC11.34□□□□□ -0.59
CHKB-CPT1BH3BT56 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CHKB-CPT1BH3BT56 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms