Protein–RNA interactions for Protein: A6NLE4

SMIM23, Small integral membrane protein 23, humanhuman

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM23A6NLE4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SMIM23A6NLE4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMIM23A6NLE4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMIM23A6NLE4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.8■□□□□ 0.92
SMIM23A6NLE4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMIM23A6NLE4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMIM23A6NLE4 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMIM23A6NLE4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.8■□□□□ 0.92
SMIM23A6NLE4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.8■□□□□ 0.92
SMIM23A6NLE4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.8■□□□□ 0.92
SMIM23A6NLE4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
SMIM23A6NLE4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMIM23A6NLE4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SMIM23A6NLE4 AC018445.3-201ENST00000624177 1945 ntBASIC20.8■□□□□ 0.92
SMIM23A6NLE4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.8■□□□□ 0.92
SMIM23A6NLE4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMIM23A6NLE4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SMIM23A6NLE4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SMIM23A6NLE4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMIM23A6NLE4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMIM23A6NLE4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMIM23A6NLE4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SMIM23A6NLE4 AC009237.3-201ENST00000393279 1427 ntBASIC20.79■□□□□ 0.92
SMIM23A6NLE4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMIM23A6NLE4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SMIM23A6NLE4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SMIM23A6NLE4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMIM23A6NLE4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SMIM23A6NLE4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMIM23A6NLE4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMIM23A6NLE4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMIM23A6NLE4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SMIM23A6NLE4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMIM23A6NLE4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SMIM23A6NLE4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SMIM23A6NLE4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.79■□□□□ 0.92
SMIM23A6NLE4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMIM23A6NLE4 AC125437.2-201ENST00000625180 2167 ntBASIC20.79■□□□□ 0.92
SMIM23A6NLE4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMIM23A6NLE4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMIM23A6NLE4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SMIM23A6NLE4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMIM23A6NLE4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
SMIM23A6NLE4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMIM23A6NLE4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMIM23A6NLE4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMIM23A6NLE4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMIM23A6NLE4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMIM23A6NLE4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.78■□□□□ 0.92
SMIM23A6NLE4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SMIM23A6NLE4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.78■□□□□ 0.92
SMIM23A6NLE4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMIM23A6NLE4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.78■□□□□ 0.92
SMIM23A6NLE4 MIR4466-201ENST00000606121 54 ntBASIC20.78■□□□□ 0.92
SMIM23A6NLE4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMIM23A6NLE4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMIM23A6NLE4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMIM23A6NLE4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SMIM23A6NLE4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMIM23A6NLE4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMIM23A6NLE4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.78■□□□□ 0.92
SMIM23A6NLE4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.77■□□□□ 0.92
SMIM23A6NLE4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMIM23A6NLE4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.92
SMIM23A6NLE4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMIM23A6NLE4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
SMIM23A6NLE4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMIM23A6NLE4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SMIM23A6NLE4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMIM23A6NLE4 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SMIM23A6NLE4 GUSBP5-201ENST00000418136 578 ntBASIC20.77■□□□□ 0.92
SMIM23A6NLE4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.77■□□□□ 0.92
SMIM23A6NLE4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMIM23A6NLE4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.77■□□□□ 0.92
SMIM23A6NLE4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.77■□□□□ 0.92
SMIM23A6NLE4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMIM23A6NLE4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SMIM23A6NLE4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
SMIM23A6NLE4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.77■□□□□ 0.92
SMIM23A6NLE4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMIM23A6NLE4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SMIM23A6NLE4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SMIM23A6NLE4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SMIM23A6NLE4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
SMIM23A6NLE4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.91
SMIM23A6NLE4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
SMIM23A6NLE4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMIM23A6NLE4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SMIM23A6NLE4 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.76■□□□□ 0.91
SMIM23A6NLE4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMIM23A6NLE4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.76■□□□□ 0.91
SMIM23A6NLE4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.76■□□□□ 0.91
SMIM23A6NLE4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.76■□□□□ 0.91
SMIM23A6NLE4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMIM23A6NLE4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMIM23A6NLE4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.76■□□□□ 0.91
SMIM23A6NLE4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SMIM23A6NLE4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SMIM23A6NLE4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.76■□□□□ 0.91
SMIM23A6NLE4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms