Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CGB1A6NKQ9 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CGB1A6NKQ9 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
CGB1A6NKQ9 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CGB1A6NKQ9 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.27■□□□□ 0.2
CGB1A6NKQ9 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.27■□□□□ 0.2
CGB1A6NKQ9 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.27■□□□□ 0.2
CGB1A6NKQ9 SLC7A5P1-201ENST00000568957 537 ntBASIC16.27■□□□□ 0.2
CGB1A6NKQ9 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.27■□□□□ 0.2
CGB1A6NKQ9 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC16.27■□□□□ 0.2
CGB1A6NKQ9 MIR2861-201ENST00000636310 90 ntBASIC16.27■□□□□ 0.2
CGB1A6NKQ9 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CGB1A6NKQ9 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CGB1A6NKQ9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CGB1A6NKQ9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
CGB1A6NKQ9 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CGB1A6NKQ9 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CGB1A6NKQ9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CGB1A6NKQ9 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.27■□□□□ 0.19
CGB1A6NKQ9 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CGB1A6NKQ9 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CGB1A6NKQ9 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.27■□□□□ 0.19
CGB1A6NKQ9 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.27■□□□□ 0.19
CGB1A6NKQ9 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CGB1A6NKQ9 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CGB1A6NKQ9 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CGB1A6NKQ9 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CGB1A6NKQ9 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CGB1A6NKQ9 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CGB1A6NKQ9 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CGB1A6NKQ9 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CGB1A6NKQ9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CGB1A6NKQ9 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CGB1A6NKQ9 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CGB1A6NKQ9 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CGB1A6NKQ9 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CGB1A6NKQ9 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CGB1A6NKQ9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.26■□□□□ 0.19
CGB1A6NKQ9 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.26■□□□□ 0.19
CGB1A6NKQ9 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CGB1A6NKQ9 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.26■□□□□ 0.19
CGB1A6NKQ9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.26■□□□□ 0.19
CGB1A6NKQ9 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CGB1A6NKQ9 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CGB1A6NKQ9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CGB1A6NKQ9 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CGB1A6NKQ9 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CGB1A6NKQ9 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CGB1A6NKQ9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
CGB1A6NKQ9 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CGB1A6NKQ9 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CGB1A6NKQ9 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CGB1A6NKQ9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CGB1A6NKQ9 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CGB1A6NKQ9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CGB1A6NKQ9 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CGB1A6NKQ9 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CGB1A6NKQ9 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CGB1A6NKQ9 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CGB1A6NKQ9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CGB1A6NKQ9 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.25■□□□□ 0.19
CGB1A6NKQ9 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CGB1A6NKQ9 KRT19P1-201ENST00000405746 1186 ntBASIC16.25■□□□□ 0.19
CGB1A6NKQ9 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.25■□□□□ 0.19
CGB1A6NKQ9 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CGB1A6NKQ9 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CGB1A6NKQ9 UBE2DNL-204ENST00000602536 740 ntBASIC16.25■□□□□ 0.19
CGB1A6NKQ9 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.25■□□□□ 0.19
CGB1A6NKQ9 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.25■□□□□ 0.19
CGB1A6NKQ9 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CGB1A6NKQ9 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.25■□□□□ 0.19
CGB1A6NKQ9 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
CGB1A6NKQ9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.25■□□□□ 0.19
CGB1A6NKQ9 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CGB1A6NKQ9 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CGB1A6NKQ9 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CGB1A6NKQ9 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CGB1A6NKQ9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
CGB1A6NKQ9 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.25■□□□□ 0.19
CGB1A6NKQ9 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CGB1A6NKQ9 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CGB1A6NKQ9 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CGB1A6NKQ9 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
CGB1A6NKQ9 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CGB1A6NKQ9 AC092720.2-201ENST00000602388 1665 ntBASIC16.24■□□□□ 0.19
CGB1A6NKQ9 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CGB1A6NKQ9 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CGB1A6NKQ9 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.24■□□□□ 0.19
CGB1A6NKQ9 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CGB1A6NKQ9 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CGB1A6NKQ9 AC112907.3-201ENST00000577781 2400 ntBASIC16.24■□□□□ 0.19
CGB1A6NKQ9 AC099778.1-201ENST00000568593 1911 ntBASIC16.24■□□□□ 0.19
CGB1A6NKQ9 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CGB1A6NKQ9 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CGB1A6NKQ9 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC16.24■□□□□ 0.19
CGB1A6NKQ9 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.24■□□□□ 0.19
CGB1A6NKQ9 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC16.24■□□□□ 0.19
CGB1A6NKQ9 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.24■□□□□ 0.19
CGB1A6NKQ9 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.24■□□□□ 0.19
CGB1A6NKQ9 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms