Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
MBD3L4A6NDZ8 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MBD3L4A6NDZ8 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.98■□□□□ 0.47
MBD3L4A6NDZ8 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MBD3L4A6NDZ8 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MBD3L4A6NDZ8 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.98■□□□□ 0.47
MBD3L4A6NDZ8 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.98■□□□□ 0.47
MBD3L4A6NDZ8 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
MBD3L4A6NDZ8 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
MBD3L4A6NDZ8 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.98■□□□□ 0.47
MBD3L4A6NDZ8 AC008550.1-201ENST00000511500 884 ntBASIC17.98■□□□□ 0.47
MBD3L4A6NDZ8 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
MBD3L4A6NDZ8 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
MBD3L4A6NDZ8 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
MBD3L4A6NDZ8 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
MBD3L4A6NDZ8 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.98■□□□□ 0.47
MBD3L4A6NDZ8 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
MBD3L4A6NDZ8 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
MBD3L4A6NDZ8 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MBD3L4A6NDZ8 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
MBD3L4A6NDZ8 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MBD3L4A6NDZ8 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
MBD3L4A6NDZ8 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MBD3L4A6NDZ8 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
MBD3L4A6NDZ8 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.98■□□□□ 0.47
MBD3L4A6NDZ8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
MBD3L4A6NDZ8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MBD3L4A6NDZ8 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MBD3L4A6NDZ8 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MBD3L4A6NDZ8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MBD3L4A6NDZ8 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MBD3L4A6NDZ8 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.97■□□□□ 0.47
MBD3L4A6NDZ8 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.97■□□□□ 0.47
MBD3L4A6NDZ8 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
MBD3L4A6NDZ8 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.97■□□□□ 0.47
MBD3L4A6NDZ8 MTDHP1-201ENST00000605323 784 ntBASIC17.97■□□□□ 0.47
MBD3L4A6NDZ8 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MBD3L4A6NDZ8 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MBD3L4A6NDZ8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
MBD3L4A6NDZ8 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.97■□□□□ 0.47
MBD3L4A6NDZ8 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
MBD3L4A6NDZ8 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
MBD3L4A6NDZ8 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.96■□□□□ 0.47
MBD3L4A6NDZ8 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MBD3L4A6NDZ8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
MBD3L4A6NDZ8 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MBD3L4A6NDZ8 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.96■□□□□ 0.47
MBD3L4A6NDZ8 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
MBD3L4A6NDZ8 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
MBD3L4A6NDZ8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MBD3L4A6NDZ8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
MBD3L4A6NDZ8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
MBD3L4A6NDZ8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
MBD3L4A6NDZ8 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MBD3L4A6NDZ8 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
MBD3L4A6NDZ8 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
MBD3L4A6NDZ8 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.96■□□□□ 0.47
MBD3L4A6NDZ8 AC023632.3-201ENST00000521633 145 ntBASIC17.96■□□□□ 0.47
MBD3L4A6NDZ8 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.96■□□□□ 0.47
MBD3L4A6NDZ8 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.96■□□□□ 0.47
MBD3L4A6NDZ8 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MBD3L4A6NDZ8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.96■□□□□ 0.47
MBD3L4A6NDZ8 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
MBD3L4A6NDZ8 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MBD3L4A6NDZ8 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.96■□□□□ 0.47
MBD3L4A6NDZ8 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.46
MBD3L4A6NDZ8 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.96■□□□□ 0.46
MBD3L4A6NDZ8 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MBD3L4A6NDZ8 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
MBD3L4A6NDZ8 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
MBD3L4A6NDZ8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MBD3L4A6NDZ8 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.95■□□□□ 0.46
MBD3L4A6NDZ8 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MBD3L4A6NDZ8 FEM1AP4-201ENST00000443167 1987 ntBASIC17.95■□□□□ 0.46
MBD3L4A6NDZ8 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MBD3L4A6NDZ8 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.95■□□□□ 0.46
MBD3L4A6NDZ8 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MBD3L4A6NDZ8 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MBD3L4A6NDZ8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MBD3L4A6NDZ8 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
MBD3L4A6NDZ8 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.95■□□□□ 0.46
MBD3L4A6NDZ8 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MBD3L4A6NDZ8 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.95■□□□□ 0.46
MBD3L4A6NDZ8 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MBD3L4A6NDZ8 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.95■□□□□ 0.46
MBD3L4A6NDZ8 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MBD3L4A6NDZ8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.95■□□□□ 0.46
MBD3L4A6NDZ8 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
MBD3L4A6NDZ8 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
MBD3L4A6NDZ8 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MBD3L4A6NDZ8 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.95■□□□□ 0.46
MBD3L4A6NDZ8 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
MBD3L4A6NDZ8 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
MBD3L4A6NDZ8 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
MBD3L4A6NDZ8 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
MBD3L4A6NDZ8 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MBD3L4A6NDZ8 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MBD3L4A6NDZ8 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.95■□□□□ 0.46
MBD3L4A6NDZ8 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MBD3L4A6NDZ8 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms