Protein–RNA interactions for Protein: A0A0B7P3V8

TY4B-P, Transposon Ty4-P Gag-Pol polyprotein, yeast

Predictions only

Length 1,104 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
TY4B-P	A0A0B7P3V8	YPR146C	YPR146C	330 nt		3.54	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	YBR224W	YBR224W	516 nt		3.54	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	YIL166C	YIL166C	1629 nt		3.54	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	EXO84	YBR102C	2262 nt		3.54	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	URB2	YJR041C	3525 nt		3.53	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	RRN6	YBL014C	2685 nt		3.53	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	YGR250C	YGR250C	2346 nt		3.53	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	RRT15	YLR162W-A	189 nt		3.53	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	YJL181W	YJL181W	1836 nt		3.53	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	AI5_ALPHA	Q0070	1893 nt		3.52	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	NPC2	YDL046W	522 nt		3.52	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	YJL222W-B	YJL222W-B	138 nt		3.52	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	YOR015W	YOR015W	360 nt		3.52	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	YPR014C	YPR014C	330 nt		3.52	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	PSK1	YAL017W	4071 nt		3.52	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	RCY1	YJL204C	2523 nt		3.52	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	MSD1	YPL104W	1977 nt		3.52	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	FAR1	YJL157C	2493 nt		3.51	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	CUL3	YGR003W	2235 nt		3.51	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	SSM4	YIL030C	3960 nt		3.51	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	GPI13	YLL031C	3054 nt		3.51	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	21S_rRNA	21S_rRNA	3296 nt		3.51	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	GYL1	YMR192W	2163 nt		3.51	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	YCG1	YDR325W	3108 nt		3.51	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	ORC2	YBR060C	1863 nt		3.51	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	RDS1	YCR106W	2499 nt		3.51	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	LEU3	YLR451W	2661 nt		3.51	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	KAP104	YBR017C	2757 nt		3.5	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	ECM5	YMR176W	4236 nt		3.5	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	YBL053W	YBL053W	375 nt		3.5	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	CSE2	YNR010W	450 nt		3.5	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	BRO1	YPL084W	2535 nt		3.5	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	EPL1	YFL024C	2499 nt		3.5	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	HDA3	YPR179C	1968 nt		3.49	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	BIT61	YJL058C	1632 nt		3.49	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	TFB1	YDR311W	1929 nt		3.49	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	NOP4	YPL043W	2058 nt		3.49	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	YGL217C	YGL217C	342 nt		3.49	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	TRM7	YBR061C	933 nt		3.49	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	DIA2	YOR080W	2199 nt		3.49	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	YMR317W	YMR317W	3423 nt		3.48	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	YER121W	YER121W	345 nt		3.48	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	YHL006W-A	YHL006W-A	354 nt		3.48	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	RPS27A	YKL156W	249 nt		3.48	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	YBR121C-A	YBR121C-A	159 nt		3.48	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	PUF6	YDR496C	1971 nt		3.48	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	MDN1	YLR106C	14733 nt		3.47	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	SMD1	YGR074W	441 nt		3.47	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	YNL097C-B	YNL097C-B	123 nt		3.47	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	YOR381W-A	YOR381W-A	168 nt		3.47	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	snR46	snR46	197 nt		3.47	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	RIX1	YHR197W	2292 nt		3.47	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	SSE1	YPL106C	2082 nt		3.47	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	TRS120	YDR407C	3870 nt		3.46	□□□□□ -1.85
TY4B-P	A0A0B7P3V8	NPR1	YNL183C	2373 nt		3.46	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	RBK1	YCR036W	1002 nt		3.46	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	DYN2	YDR424C	279 nt		3.46	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	YIL059C	YIL059C	366 nt		3.46	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	YOR329W-A	YOR329W-A	210 nt		3.46	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	YAT2	YER024W	2772 nt		3.46	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	SIP3	YNL257C	3690 nt		3.46	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	TSC11	YER093C	4293 nt		3.45	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	RPL38	YLR325C	237 nt		3.45	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	snR191	snR191	274 nt		3.45	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	TAF1	YGR274C	3201 nt		3.44	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	COX19	YLL018C-A	297 nt		3.44	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	MRPL33	YMR286W	261 nt		3.44	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	GOT1	YMR292W	417 nt		3.44	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	snR52	snR52	92 nt		3.44	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	CSR2	YPR030W	3366 nt		3.44	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	APC2	YLR127C	2562 nt		3.44	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	PDE2	YOR360C	1581 nt		3.43	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	GCD6	YDR211W	2139 nt		3.43	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	BNI4	YNL233W	2679 nt		3.43	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	UPS1	YLR193C	528 nt		3.43	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	YOR376W	YOR376W	369 nt		3.43	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	YBR182C-A	YBR182C-A	195 nt		3.43	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	SKT5	YBL061C	2091 nt		3.42	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	DIS3	YOL021C	3006 nt		3.42	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	FAP7	YDL166C	594 nt		3.42	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	RPS27B	YHR021C	249 nt		3.42	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	SLA1	YBL007C	3735 nt		3.42	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	DSE4	YNR067C	3354 nt		3.42	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	TOF2	YKR010C	2316 nt		3.42	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	YEL025C	YEL025C	3567 nt		3.41	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	VTC4	YJL012C	2166 nt		3.41	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	ITC1	YGL133W	3795 nt		3.41	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	RPS17B	YDR447C	411 nt		3.41	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	TMA19	YKL056C	504 nt		3.41	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	APC9	YLR102C	798 nt		3.41	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	LCD1	YDR499W	2244 nt		3.41	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	ATG26	YLR189C	3597 nt		3.41	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	MDM20	YOL076W	2391 nt		3.41	□□□□□ -1.86
TY4B-P	A0A0B7P3V8	YDR426C	YDR426C	378 nt		3.4	□□□□□ -1.87
TY4B-P	A0A0B7P3V8	QCR7	YDR529C	384 nt		3.4	□□□□□ -1.87
TY4B-P	A0A0B7P3V8	YMR324C	YMR324C	243 nt		3.4	□□□□□ -1.87
TY4B-P	A0A0B7P3V8	RRP5	YMR229C	5190 nt		3.4	□□□□□ -1.87
TY4B-P	A0A0B7P3V8	YLL007C	YLL007C	1998 nt		3.4	□□□□□ -1.87
TY4B-P	A0A0B7P3V8	SEC5	YDR166C	2916 nt		3.39	□□□□□ -1.87
TY4B-P	A0A0B7P3V8	COX23	YHR116W	456 nt		3.39	□□□□□ -1.87

Retrieved 100 of 7,029 protein–RNA pairs in 82.3 ms