Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 AL355355.2-201ENST00000442321 338 ntBASIC26.15■■□□□ 1.78
LOC102724428A0A0B4J2F2 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC26.15■■□□□ 1.78
LOC102724428A0A0B4J2F2 RPS15-203ENST00000586096 570 ntTSL 2 BASIC26.15■■□□□ 1.78
LOC102724428A0A0B4J2F2 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
LOC102724428A0A0B4J2F2 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC26.15■■□□□ 1.78
LOC102724428A0A0B4J2F2 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC26.15■■□□□ 1.78
LOC102724428A0A0B4J2F2 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
LOC102724428A0A0B4J2F2 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
LOC102724428A0A0B4J2F2 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC26.15■■□□□ 1.78
LOC102724428A0A0B4J2F2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
LOC102724428A0A0B4J2F2 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
LOC102724428A0A0B4J2F2 KRT16P5-201ENST00000455284 522 ntBASIC26.14■■□□□ 1.78
LOC102724428A0A0B4J2F2 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC26.14■■□□□ 1.78
LOC102724428A0A0B4J2F2 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC26.14■■□□□ 1.78
LOC102724428A0A0B4J2F2 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC26.14■■□□□ 1.78
LOC102724428A0A0B4J2F2 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
LOC102724428A0A0B4J2F2 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
LOC102724428A0A0B4J2F2 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
LOC102724428A0A0B4J2F2 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
LOC102724428A0A0B4J2F2 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.77
LOC102724428A0A0B4J2F2 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
LOC102724428A0A0B4J2F2 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.77
LOC102724428A0A0B4J2F2 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
LOC102724428A0A0B4J2F2 ME2-208ENST00000638937 2471 ntTSL 5 BASIC26.13■■□□□ 1.77
LOC102724428A0A0B4J2F2 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
LOC102724428A0A0B4J2F2 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
LOC102724428A0A0B4J2F2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
LOC102724428A0A0B4J2F2 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC26.13■■□□□ 1.77
LOC102724428A0A0B4J2F2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC26.13■■□□□ 1.77
LOC102724428A0A0B4J2F2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
LOC102724428A0A0B4J2F2 KRT18P35-201ENST00000510488 1269 ntBASIC26.13■■□□□ 1.77
LOC102724428A0A0B4J2F2 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC26.13■■□□□ 1.77
LOC102724428A0A0B4J2F2 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC26.13■■□□□ 1.77
LOC102724428A0A0B4J2F2 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
LOC102724428A0A0B4J2F2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
LOC102724428A0A0B4J2F2 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
LOC102724428A0A0B4J2F2 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC26.12■■□□□ 1.77
LOC102724428A0A0B4J2F2 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC26.12■■□□□ 1.77
LOC102724428A0A0B4J2F2 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC26.12■■□□□ 1.77
LOC102724428A0A0B4J2F2 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC26.12■■□□□ 1.77
LOC102724428A0A0B4J2F2 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC26.12■■□□□ 1.77
LOC102724428A0A0B4J2F2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC26.12■■□□□ 1.77
LOC102724428A0A0B4J2F2 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC26.12■■□□□ 1.77
LOC102724428A0A0B4J2F2 CASK-201ENST00000378154 2494 ntTSL 5 BASIC26.12■■□□□ 1.77
LOC102724428A0A0B4J2F2 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
LOC102724428A0A0B4J2F2 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
LOC102724428A0A0B4J2F2 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
LOC102724428A0A0B4J2F2 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
LOC102724428A0A0B4J2F2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC26.12■■□□□ 1.77
LOC102724428A0A0B4J2F2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC26.11■■□□□ 1.77
LOC102724428A0A0B4J2F2 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
LOC102724428A0A0B4J2F2 FAM197Y1-201ENST00000421178 764 ntBASIC26.11■■□□□ 1.77
LOC102724428A0A0B4J2F2 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC26.11■■□□□ 1.77
LOC102724428A0A0B4J2F2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC26.11■■□□□ 1.77
LOC102724428A0A0B4J2F2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC26.11■■□□□ 1.77
LOC102724428A0A0B4J2F2 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
LOC102724428A0A0B4J2F2 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
LOC102724428A0A0B4J2F2 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
LOC102724428A0A0B4J2F2 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC26.1■■□□□ 1.77
LOC102724428A0A0B4J2F2 AC124283.5-201ENST00000624661 1809 ntBASIC26.1■■□□□ 1.77
LOC102724428A0A0B4J2F2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC26.1■■□□□ 1.77
LOC102724428A0A0B4J2F2 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC26.1■■□□□ 1.77
LOC102724428A0A0B4J2F2 AL353807.1-201ENST00000427475 662 ntBASIC26.1■■□□□ 1.77
LOC102724428A0A0B4J2F2 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC26.1■■□□□ 1.77
LOC102724428A0A0B4J2F2 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
LOC102724428A0A0B4J2F2 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC26.1■■□□□ 1.77
LOC102724428A0A0B4J2F2 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC26.1■■□□□ 1.77
LOC102724428A0A0B4J2F2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
LOC102724428A0A0B4J2F2 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
LOC102724428A0A0B4J2F2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
LOC102724428A0A0B4J2F2 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
LOC102724428A0A0B4J2F2 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
LOC102724428A0A0B4J2F2 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC26.09■■□□□ 1.77
LOC102724428A0A0B4J2F2 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC26.09■■□□□ 1.77
LOC102724428A0A0B4J2F2 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
LOC102724428A0A0B4J2F2 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
LOC102724428A0A0B4J2F2 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC26.09■■□□□ 1.77
LOC102724428A0A0B4J2F2 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC26.09■■□□□ 1.77
LOC102724428A0A0B4J2F2 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC26.09■■□□□ 1.77
LOC102724428A0A0B4J2F2 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
LOC102724428A0A0B4J2F2 NBPF21P-201ENST00000425093 1451 ntBASIC26.09■■□□□ 1.77
LOC102724428A0A0B4J2F2 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC26.09■■□□□ 1.77
LOC102724428A0A0B4J2F2 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC26.09■■□□□ 1.77
LOC102724428A0A0B4J2F2 SRI-203ENST00000419179 1307 ntTSL 2 BASIC26.09■■□□□ 1.77
LOC102724428A0A0B4J2F2 GOLGA2P6-201ENST00000340929 2049 ntBASIC26.09■■□□□ 1.77
LOC102724428A0A0B4J2F2 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
LOC102724428A0A0B4J2F2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
LOC102724428A0A0B4J2F2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
LOC102724428A0A0B4J2F2 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC26.08■■□□□ 1.77
LOC102724428A0A0B4J2F2 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
LOC102724428A0A0B4J2F2 F2R-202ENST00000505600 442 ntTSL 2 BASIC26.08■■□□□ 1.77
LOC102724428A0A0B4J2F2 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC26.08■■□□□ 1.77
LOC102724428A0A0B4J2F2 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC26.08■■□□□ 1.77
LOC102724428A0A0B4J2F2 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
LOC102724428A0A0B4J2F2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
LOC102724428A0A0B4J2F2 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
LOC102724428A0A0B4J2F2 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC26.07■■□□□ 1.76
LOC102724428A0A0B4J2F2 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
LOC102724428A0A0B4J2F2 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC26.07■■□□□ 1.76
LOC102724428A0A0B4J2F2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC26.07■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms