Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV21A0A0B4J279 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV21A0A0B4J279 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV21A0A0B4J279 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV21A0A0B4J279 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV21A0A0B4J279 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV21A0A0B4J279 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV21A0A0B4J279 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV21A0A0B4J279 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV21A0A0B4J279 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV21A0A0B4J279 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV21A0A0B4J279 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV21A0A0B4J279 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV21A0A0B4J279 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV21A0A0B4J279 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV21A0A0B4J279 AL136967.2-201ENST00000623968 743 ntBASIC15.13■□□□□ 0.01
TRAV21A0A0B4J279 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV21A0A0B4J279 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV21A0A0B4J279 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV21A0A0B4J279 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV21A0A0B4J279 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRAV21A0A0B4J279 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRAV21A0A0B4J279 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRAV21A0A0B4J279 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV21A0A0B4J279 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV21A0A0B4J279 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV21A0A0B4J279 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV21A0A0B4J279 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TRAV21A0A0B4J279 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV21A0A0B4J279 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV21A0A0B4J279 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV21A0A0B4J279 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV21A0A0B4J279 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV21A0A0B4J279 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV21A0A0B4J279 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV21A0A0B4J279 AC138907.5-202ENST00000569484 235 ntBASIC15.12■□□□□ 0.01
TRAV21A0A0B4J279 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV21A0A0B4J279 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV21A0A0B4J279 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV21A0A0B4J279 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV21A0A0B4J279 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TRAV21A0A0B4J279 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TRAV21A0A0B4J279 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV21A0A0B4J279 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV21A0A0B4J279 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV21A0A0B4J279 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV21A0A0B4J279 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TRAV21A0A0B4J279 AC099778.1-201ENST00000568593 1911 ntBASIC15.11■□□□□ 0.01
TRAV21A0A0B4J279 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRAV21A0A0B4J279 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV21A0A0B4J279 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV21A0A0B4J279 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV21A0A0B4J279 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC15.11■□□□□ 0.01
TRAV21A0A0B4J279 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV21A0A0B4J279 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV21A0A0B4J279 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC15.11■□□□□ 0.01
TRAV21A0A0B4J279 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRAV21A0A0B4J279 NME4-202ENST00000382940 766 ntTSL 3 BASIC15.11■□□□□ 0.01
TRAV21A0A0B4J279 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAV21A0A0B4J279 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV21A0A0B4J279 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAV21A0A0B4J279 NME4-211ENST00000620944 1193 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV21A0A0B4J279 RARRES2P11-201ENST00000635158 484 ntBASIC15.11■□□□□ 0.01
TRAV21A0A0B4J279 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV21A0A0B4J279 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV21A0A0B4J279 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV21A0A0B4J279 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV21A0A0B4J279 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRAV21A0A0B4J279 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TRAV21A0A0B4J279 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV21A0A0B4J279 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV21A0A0B4J279 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV21A0A0B4J279 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAV21A0A0B4J279 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV21A0A0B4J279 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRAV21A0A0B4J279 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAV21A0A0B4J279 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV21A0A0B4J279 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV21A0A0B4J279 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV21A0A0B4J279 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV21A0A0B4J279 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
TRAV21A0A0B4J279 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV21A0A0B4J279 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRAV21A0A0B4J279 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV21A0A0B4J279 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV21A0A0B4J279 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV21A0A0B4J279 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV21A0A0B4J279 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV21A0A0B4J279 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV21A0A0B4J279 SERP1-208ENST00000491660 830 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV21A0A0B4J279 AC110285.6-201ENST00000617652 491 ntBASIC15.1■□□□□ 0.01
TRAV21A0A0B4J279 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV21A0A0B4J279 AC116050.2-201ENST00000612102 1779 ntBASIC15.1■□□□□ 0.01
TRAV21A0A0B4J279 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV21A0A0B4J279 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV21A0A0B4J279 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TRAV21A0A0B4J279 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV21A0A0B4J279 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV21A0A0B4J279 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV21A0A0B4J279 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms