Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.03■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.03■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 BID-214ENST00000617586 542 ntTSL 5 BASIC18.03■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.03■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.03■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.02■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.02■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.01■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 CYP21A1P-202ENST00000354927 1481 ntBASIC18.01■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 SMG8-203ENST00000578922 2178 ntBASIC18.01■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.01■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.01■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.01■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.01■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.01■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.01■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.01■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.01■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.01■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 AC099778.1-201ENST00000568593 1911 ntBASIC18.01■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.01■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.01■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 AC004911.1-201ENST00000416316 871 ntBASIC18■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 AL162412.1-201ENST00000567129 965 ntBASIC18■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.99■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.99■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.99■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.99■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.99■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.99■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.99■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.99■□□□□ 0.47
IGKV1D-43A0A0B4J1Z2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms