Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 SEMA7A-205ENST00000569617 473 ntTSL 310.26□□□□□ -0.775e-9■■□□□ 13.9
PRPF8Q6P2Q9 SEMA3B-207ENST00000441915 2710 ntTSL 1 (best)12.37□□□□□ -0.437e-13■■□□□ 13.9
PRPF8Q6P2Q9 C1orf35-202ENST00000465199 588 ntTSL 518.24■□□□□ 0.519e-7■■□□□ 13.9
PRPF8Q6P2Q9 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15□□□□□ -0.011e-6■■□□□ 13.9
PRPF8Q6P2Q9 MED16-209ENST00000592943 1628 ntTSL 1 (best)14.49□□□□□ -0.091e-6■■□□□ 13.9
PRPF8Q6P2Q9 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.29□□□□□ -0.121e-6■■□□□ 13.9
PRPF8Q6P2Q9 MED16-205ENST00000586017 1403 ntTSL 1 (best)12.56□□□□□ -0.41e-6■■□□□ 13.9
PRPF8Q6P2Q9 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.51e-6■■□□□ 13.9
PRPF8Q6P2Q9 MED16-211ENST00000606828 599 ntTSL 1 (best)11.57□□□□□ -0.561e-6■■□□□ 13.9
PRPF8Q6P2Q9 SRRT-206ENST00000460194 575 ntTSL 211.7□□□□□ -0.545e-8■■□□□ 13.8
PRPF8Q6P2Q9 BNIP3-204ENST00000633835 1062 ntTSL 318.45■□□□□ 0.549e-9■■□□□ 13.8
PRPF8Q6P2Q9 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.669e-9■■□□□ 13.8
PRPF8Q6P2Q9 BNIP3-202ENST00000540159 3066 ntTSL 1 (best)10.9□□□□□ -0.669e-9■■□□□ 13.8
PRPF8Q6P2Q9 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.288e-7■■□□□ 13.8
PRPF8Q6P2Q9 RGS12-225ENST00000515521 796 ntTSL 512.64□□□□□ -0.393e-6■■□□□ 13.8
PRPF8Q6P2Q9 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.586e-38■■□□□ 13.8
PRPF8Q6P2Q9 POLD1-203ENST00000593887 695 ntTSL 513.09□□□□□ -0.316e-9■■□□□ 13.8
PRPF8Q6P2Q9 RABGGTA-218ENST00000560777 1197 ntTSL 5 BASIC9.96□□□□□ -0.811e-6■■□□□ 13.8
PRPF8Q6P2Q9 MARS-219ENST00000549603 402 ntTSL 39.42□□□□□ -0.93e-7■■□□□ 13.8
PRPF8Q6P2Q9 ASGR1-207ENST00000574330 887 ntTSL 514.18□□□□□ -0.143e-18■■□□□ 13.8
PRPF8Q6P2Q9 ANP32A-204ENST00000480858 352 ntTSL 1 (best)12.67□□□□□ -0.383e-7■■□□□ 13.8
PRPF8Q6P2Q9 AC107871.1-203ENST00000637054 3238 ntTSL 513.72□□□□□ -0.212e-7■■□□□ 13.8
PRPF8Q6P2Q9 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.312e-7■■□□□ 13.8
PRPF8Q6P2Q9 AC107871.1-201ENST00000637888 2941 ntTSL 513.09□□□□□ -0.312e-7■■□□□ 13.8
PRPF8Q6P2Q9 SLC5A9-204ENST00000441260 1046 ntTSL 213.78□□□□□ -0.23e-8■■□□□ 13.8
PRPF8Q6P2Q9 PPP2CA-201ENST00000231504 564 ntTSL 423.16■■□□□ 1.32e-8■■□□□ 13.8
PRPF8Q6P2Q9 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.294e-9■■□□□ 13.8
PRPF8Q6P2Q9 AC104109.4-201ENST00000520515 1744 ntTSL 26.39□□□□□ -1.392e-8■■□□□ 13.8
PRPF8Q6P2Q9 ACTB-212ENST00000484841 1032 ntTSL 517.27■□□□□ 0.361e-13■■□□□ 13.8
PRPF8Q6P2Q9 ACTB-209ENST00000473257 556 ntTSL 39.96□□□□□ -0.821e-13■■□□□ 13.8
PRPF8Q6P2Q9 MICAL1-205ENST00000456101 4112 ntTSL 210.63□□□□□ -0.713e-6■■□□□ 13.8
PRPF8Q6P2Q9 INTS6L-203ENST00000481908 3528 ntTSL 29.35□□□□□ -0.912e-6■■□□□ 13.8
PRPF8Q6P2Q9 INTS6L-201ENST00000370752 3793 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.932e-6■■□□□ 13.8
PRPF8Q6P2Q9 INTS6L-206ENST00000639893 3904 ntTSL 5 BASIC9.19□□□□□ -0.942e-6■■□□□ 13.8
PRPF8Q6P2Q9 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.23□□□□□ -1.732e-7■■□□□ 13.8
PRPF8Q6P2Q9 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.962e-7■■□□□ 13.8
PRPF8Q6P2Q9 INTS6L-204ENST00000493637 6710 ntTSL 1 (best)2.24□□□□□ -2.052e-6■■□□□ 13.8
PRPF8Q6P2Q9 ACADVL-229ENST00000582356 633 ntTSL 419.32■□□□□ 0.681e-8■■□□□ 13.8
PRPF8Q6P2Q9 ACADVL-238ENST00000584103 555 ntTSL 418.69■□□□□ 0.581e-8■■□□□ 13.8
PRPF8Q6P2Q9 GNPAT-203ENST00000436239 839 ntAPPRIS ALT2 TSL 314.92□□□□□ -0.026e-8■■□□□ 13.8
PRPF8Q6P2Q9 CDK5RAP3-207ENST00000578134 831 ntTSL 313.74□□□□□ -0.214e-7■■□□□ 13.8
PRPF8Q6P2Q9 CDK5RAP3-204ENST00000577664 568 ntTSL 49.36□□□□□ -0.914e-7■■□□□ 13.8
PRPF8Q6P2Q9 CDK5RAP3-214ENST00000579632 738 ntTSL 48.43□□□□□ -1.064e-7■■□□□ 13.8
PRPF8Q6P2Q9 CDK5RAP3-227ENST00000583352 901 ntTSL 38.37□□□□□ -1.074e-7■■□□□ 13.8
PRPF8Q6P2Q9 CDK5RAP3-208ENST00000578525 564 ntTSL 46.91□□□□□ -1.34e-7■■□□□ 13.8
PRPF8Q6P2Q9 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.492e-7■■□□□ 13.8
PRPF8Q6P2Q9 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.512e-7■■□□□ 13.8
PRPF8Q6P2Q9 TCF25-208ENST00000563032 274 ntTSL 217.56■□□□□ 0.43e-6■■□□□ 13.8
PRPF8Q6P2Q9 PLA2G4B-203ENST00000461382 1530 ntTSL 215.19■□□□□ 0.021e-6■■□□□ 13.8
PRPF8Q6P2Q9 TCF25-203ENST00000561585 981 ntTSL 215□□□□□ -0.013e-7■■□□□ 13.8
PRPF8Q6P2Q9 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.669e-7■■□□□ 13.8
PRPF8Q6P2Q9 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.719e-7■■□□□ 13.8
PRPF8Q6P2Q9 JMJD7-PLA2G4B-204ENST00000487292 3178 ntTSL 29.82□□□□□ -0.849e-7■■□□□ 13.8
PRPF8Q6P2Q9 CDC27-213ENST00000571643 716 ntTSL 32.62□□□□□ -1.993e-6■■□□□ 13.8
PRPF8Q6P2Q9 UBA2-204ENST00000588585 171 ntTSL 3-4.31□□□□□ -3.12e-10■■□□□ 13.8
PRPF8Q6P2Q9 CCS-209ENST00000534763 777 ntTSL 210.78□□□□□ -0.682e-13■■□□□ 13.8
PRPF8Q6P2Q9 CCS-202ENST00000525435 798 ntTSL 210.32□□□□□ -0.762e-13■■□□□ 13.8
PRPF8Q6P2Q9 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.095e-7■■□□□ 13.8
PRPF8Q6P2Q9 TMEM94-206ENST00000577380 554 ntTSL 420.96■□□□□ 0.959e-12■■□□□ 13.8
PRPF8Q6P2Q9 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.75■□□□□ 0.753e-6■■□□□ 13.8
PRPF8Q6P2Q9 ZNF180-203ENST00000585514 564 ntTSL 318.71■□□□□ 0.593e-6■■□□□ 13.8
PRPF8Q6P2Q9 TMEM94-220ENST00000581519 545 ntTSL 417.61■□□□□ 0.419e-12■■□□□ 13.8
PRPF8Q6P2Q9 ZNF180-210ENST00000592140 533 ntTSL 517.08■□□□□ 0.323e-6■■□□□ 13.8
PRPF8Q6P2Q9 ZNF180-207ENST00000590366 538 ntTSL 516.62■□□□□ 0.253e-6■■□□□ 13.8
PRPF8Q6P2Q9 ST3GAL1-209ENST00000522204 665 ntTSL 216.36■□□□□ 0.212e-7■■□□□ 13.8
PRPF8Q6P2Q9 ZNF180-208ENST00000591064 837 ntTSL 314.18□□□□□ -0.143e-6■■□□□ 13.8
PRPF8Q6P2Q9 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.99□□□□□ -0.333e-6■■□□□ 13.8
PRPF8Q6P2Q9 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.543e-6■■□□□ 13.8
PRPF8Q6P2Q9 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.633e-6■■□□□ 13.8
PRPF8Q6P2Q9 ZNF180-206ENST00000590088 3131 ntTSL 1 (best)11.04□□□□□ -0.643e-6■■□□□ 13.8
PRPF8Q6P2Q9 ZNF180-211ENST00000592529 3048 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.913e-6■■□□□ 13.8
PRPF8Q6P2Q9 ZNF180-209ENST00000592095 3270 ntTSL 1 (best)8.65□□□□□ -1.023e-6■■□□□ 13.8
PRPF8Q6P2Q9 DENND5A-205ENST00000526707 2861 ntTSL 214.33□□□□□ -0.121e-6■■□□□ 13.8
PRPF8Q6P2Q9 SAFB2-207ENST00000591101 551 ntTSL 28.03□□□□□ -1.123e-8■■□□□ 13.8
PRPF8Q6P2Q9 VPS35-202ENST00000561713 589 ntTSL 416.59■□□□□ 0.251e-8■■□□□ 13.8
PRPF8Q6P2Q9 VPS35-211ENST00000569950 1096 ntTSL 57.85□□□□□ -1.151e-8■■□□□ 13.8
PRPF8Q6P2Q9 VPS35-205ENST00000563984 775 ntTSL 22.47□□□□□ -2.011e-8■■□□□ 13.8
PRPF8Q6P2Q9 VPS35-208ENST00000568612 697 ntTSL 51.78□□□□□ -2.121e-8■■□□□ 13.8
PRPF8Q6P2Q9 TEPSIN-210ENST00000575891 556 ntTSL 416.72■□□□□ 0.276e-9■■□□□ 13.8
PRPF8Q6P2Q9 TEPSIN-211ENST00000575961 564 ntTSL 415.7■□□□□ 0.16e-9■■□□□ 13.8
PRPF8Q6P2Q9 TEPSIN-205ENST00000571601 710 ntTSL 214.44□□□□□ -0.16e-9■■□□□ 13.8
PRPF8Q6P2Q9 ASXL2-202ENST00000404843 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.24e-7■■□□□ 13.8
PRPF8Q6P2Q9 HMG20B-209ENST00000470356 806 ntTSL 1 (best)27.18■■□□□ 1.948e-9■■□□□ 13.8
PRPF8Q6P2Q9 HMG20B-206ENST00000453933 759 ntTSL 219.25■□□□□ 0.678e-9■■□□□ 13.8
PRPF8Q6P2Q9 HMG20B-204ENST00000417382 561 ntTSL 417.91■□□□□ 0.468e-9■■□□□ 13.8
PRPF8Q6P2Q9 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.414e-9■■□□□ 13.8
PRPF8Q6P2Q9 EEF1D-229ENST00000530109 533 ntTSL 213.36□□□□□ -0.275e-8■■□□□ 13.8
PRPF8Q6P2Q9 CALR-207ENST00000590325 781 ntTSL 211.93□□□□□ -0.51e-9■■□□□ 13.8
PRPF8Q6P2Q9 PDHA1-209ENST00000479146 535 ntTSL 211.38□□□□□ -0.591e-7■■□□□ 13.8
PRPF8Q6P2Q9 NDRG1-208ENST00000518094 347 ntTSL 27.49□□□□□ -1.213e-9■■□□□ 13.8
PRPF8Q6P2Q9 TMCO6-212ENST00000514449 760 ntTSL 521.11■□□□□ 0.972e-6■■□□□ 13.8
PRPF8Q6P2Q9 TMCO6-204ENST00000504069 543 ntTSL 515.39■□□□□ 0.052e-6■■□□□ 13.8
PRPF8Q6P2Q9 TMCO6-214ENST00000515653 611 ntTSL 310.78□□□□□ -0.682e-6■■□□□ 13.8
PRPF8Q6P2Q9 PABPC4-208ENST00000461578 193 ntTSL 512.26□□□□□ -0.453e-14■■□□□ 13.8
PRPF8Q6P2Q9 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.622e-9■■□□□ 13.8
PRPF8Q6P2Q9 GSDMD-209ENST00000529854 511 ntTSL 414.43□□□□□ -0.17e-10■■□□□ 13.8
PRPF8Q6P2Q9 GSDMD-204ENST00000525721 442 ntTSL 413.73□□□□□ -0.217e-10■■□□□ 13.8
PRPF8Q6P2Q9 SF3A1-204ENST00000447376 418 ntTSL 513.75□□□□□ -0.211e-8■■□□□ 13.8
PRPF8Q6P2Q9 CAPN1-212ENST00000527887 348 ntTSL 312.14□□□□□ -0.471e-8■■□□□ 13.8
PRPF8Q6P2Q9 SF3A1-207ENST00000471342 459 ntTSL 28.04□□□□□ -1.121e-8■■□□□ 13.8
Retrieved 100 of 73,762 protein–RNA pairs in 1213.5 ms