Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 NEK9-204ENST00000554258 578 ntTSL 315.84■□□□□ 0.132e-6■■□□□ 13.9
PRPF8Q6P2Q9 MPI-221ENST00000568840 882 ntTSL 215.76■□□□□ 0.112e-6■■□□□ 13.9
PRPF8Q6P2Q9 CUL9-216ENST00000513904 938 ntTSL 415.76■□□□□ 0.115e-6■■□□□ 13.9
PRPF8Q6P2Q9 CUL9-209ENST00000505172 571 ntTSL 415.72■□□□□ 0.115e-6■■□□□ 13.9
PRPF8Q6P2Q9 DCAF6-205ENST00000450548 724 ntTSL 315.69■□□□□ 0.12e-9■■□□□ 13.9
PRPF8Q6P2Q9 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.64■□□□□ 0.093e-9■■□□□ 13.9
PRPF8Q6P2Q9 MIS18BP1-204ENST00000454990 2131 ntTSL 215.63■□□□□ 0.096e-12■■□□□ 13.9
PRPF8Q6P2Q9 COMMD6-202ENST00000377612 580 ntTSL 515.57■□□□□ 0.082e-6■■□□□ 13.9
PRPF8Q6P2Q9 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.082e-6■■□□□ 13.9
PRPF8Q6P2Q9 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC15.5■□□□□ 0.072e-6■■□□□ 13.9
PRPF8Q6P2Q9 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.41■□□□□ 0.063e-8■■□□□ 13.9
PRPF8Q6P2Q9 RFXANK-212ENST00000543157 919 ntTSL 215.37■□□□□ 0.052e-6■■□□□ 13.9
PRPF8Q6P2Q9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.056e-12■■□□□ 13.9
PRPF8Q6P2Q9 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.046e-12■■□□□ 13.9
PRPF8Q6P2Q9 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.043e-7■■□□□ 13.9
PRPF8Q6P2Q9 CD3EAP-204ENST00000592852 1061 ntTSL 215.3■□□□□ 0.045e-6■■□□□ 13.9
PRPF8Q6P2Q9 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC15.2■□□□□ 0.022e-6■■□□□ 13.9
PRPF8Q6P2Q9 VPS37A-203ENST00000518038 655 ntTSL 315.2■□□□□ 0.023e-13■■□□□ 13.9
PRPF8Q6P2Q9 MPI-224ENST00000569931 969 ntTSL 315.18■□□□□ 0.023e-8■■□□□ 13.9
PRPF8Q6P2Q9 ST3GAL3-230ENST00000530154 1670 ntTSL 215.18■□□□□ 0.022e-6■■□□□ 13.9
PRPF8Q6P2Q9 AP002748.3-204ENST00000527274 944 ntTSL 215.14■□□□□ 0.012e-6■■□□□ 13.9
PRPF8Q6P2Q9 CUL9-204ENST00000502719 875 ntTSL 315.07■□□□□ 05e-6■■□□□ 13.9
PRPF8Q6P2Q9 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC15.05■□□□□ -02e-6■■□□□ 13.9
PRPF8Q6P2Q9 INTS1-204ENST00000482994 498 ntTSL 315.03■□□□□ -02e-6■■□□□ 13.9
PRPF8Q6P2Q9 TP53I13-206ENST00000579674 2468 nt15.02■□□□□ -03e-9■■□□□ 13.9
PRPF8Q6P2Q9 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.91□□□□□ -0.023e-9■■□□□ 13.9
PRPF8Q6P2Q9 TMEM50A-202ENST00000468704 799 ntTSL 314.9□□□□□ -0.022e-6■■□□□ 13.9
PRPF8Q6P2Q9 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.032e-6■■□□□ 13.9
PRPF8Q6P2Q9 MAT2B-203ENST00000421814 698 ntTSL 514.86□□□□□ -0.032e-6■■□□□ 13.9
PRPF8Q6P2Q9 HMOX2-209ENST00000572812 549 ntTSL 414.85□□□□□ -0.036e-12■■□□□ 13.9
PRPF8Q6P2Q9 ST3GAL3-223ENST00000479383 873 ntTSL 314.66□□□□□ -0.062e-6■■□□□ 13.9
PRPF8Q6P2Q9 TMEM44-208ENST00000432352 1445 ntTSL 1 (best)14.64□□□□□ -0.072e-6■■□□□ 13.9
PRPF8Q6P2Q9 MIS18BP1-208ENST00000494512 531 ntTSL 514.56□□□□□ -0.086e-12■■□□□ 13.9
PRPF8Q6P2Q9 NEK9-211ENST00000557673 657 ntTSL 314.47□□□□□ -0.092e-6■■□□□ 13.9
PRPF8Q6P2Q9 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.122e-6■■□□□ 13.9
PRPF8Q6P2Q9 PTPRK-208ENST00000392449 1456 ntTSL 214.31□□□□□ -0.123e-9■■□□□ 13.9
PRPF8Q6P2Q9 CLIP1-215ENST00000541108 1658 ntTSL 1 (best)14.3□□□□□ -0.122e-6■■□□□ 13.9
PRPF8Q6P2Q9 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.122e-6■■□□□ 13.9
PRPF8Q6P2Q9 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.22□□□□□ -0.136e-12■■□□□ 13.9
PRPF8Q6P2Q9 NFS1-206ENST00000419569 551 ntTSL 314.09□□□□□ -0.153e-9■■□□□ 13.9
PRPF8Q6P2Q9 SELENOH-203ENST00000533321 1454 ntTSL 1 (best)14.06□□□□□ -0.162e-6■■□□□ 13.9
PRPF8Q6P2Q9 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.166e-12■■□□□ 13.9
PRPF8Q6P2Q9 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.01□□□□□ -0.172e-6■■□□□ 13.9
PRPF8Q6P2Q9 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.182e-6■■□□□ 13.9
PRPF8Q6P2Q9 MYO9B-213ENST00000598419 544 ntTSL 513.89□□□□□ -0.196e-12■■□□□ 13.9
PRPF8Q6P2Q9 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC13.86□□□□□ -0.192e-6■■□□□ 13.9
PRPF8Q6P2Q9 TSC22D4-203ENST00000423266 1071 ntTSL 213.84□□□□□ -0.192e-6■■□□□ 13.9
PRPF8Q6P2Q9 TMEM44-213ENST00000477651 1899 ntTSL 1 (best)13.81□□□□□ -0.22e-6■■□□□ 13.9
PRPF8Q6P2Q9 TMCO3-203ENST00000460039 864 ntTSL 313.79□□□□□ -0.22e-6■■□□□ 13.9
PRPF8Q6P2Q9 VPS37A-204ENST00000519381 575 ntTSL 413.79□□□□□ -0.23e-13■■□□□ 13.9
PRPF8Q6P2Q9 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.79□□□□□ -0.22e-6■■□□□ 13.9
PRPF8Q6P2Q9 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.213e-9■■□□□ 13.9
PRPF8Q6P2Q9 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.68□□□□□ -0.223e-8■■□□□ 13.9
PRPF8Q6P2Q9 SPTLC2-203ENST00000554901 1518 ntTSL 1 (best)13.6□□□□□ -0.232e-6■■□□□ 13.9
PRPF8Q6P2Q9 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC13.57□□□□□ -0.242e-6■■□□□ 13.9
PRPF8Q6P2Q9 BX890604.1-204ENST00000475317 696 ntTSL 213.55□□□□□ -0.242e-6■■□□□ 13.9
PRPF8Q6P2Q9 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.253e-6■■□□□ 13.9
PRPF8Q6P2Q9 TM9SF1-205ENST00000528010 904 ntTSL 213.45□□□□□ -0.262e-6■■□□□ 13.9
PRPF8Q6P2Q9 TM9SF1-209ENST00000530468 1065 ntTSL 213.45□□□□□ -0.262e-6■■□□□ 13.9
PRPF8Q6P2Q9 KRTCAP2-205ENST00000482246 414 ntTSL 313.44□□□□□ -0.262e-6■■□□□ 13.9
PRPF8Q6P2Q9 ZNF414-208ENST00000600906 467 ntTSL 213.42□□□□□ -0.262e-6■■□□□ 13.9
PRPF8Q6P2Q9 GLS2-203ENST00000424141 2225 ntTSL 1 (best)13.39□□□□□ -0.275e-6■■□□□ 13.9
PRPF8Q6P2Q9 FAM131A-205ENST00000418768 812 ntTSL 313.39□□□□□ -0.272e-6■■□□□ 13.9
PRPF8Q6P2Q9 CD3EAP-203ENST00000590794 489 ntTSL 513.34□□□□□ -0.275e-6■■□□□ 13.9
PRPF8Q6P2Q9 TMEM44-210ENST00000467284 683 ntTSL 313.33□□□□□ -0.282e-6■■□□□ 13.9
PRPF8Q6P2Q9 COMMD6-209ENST00000477377 533 ntTSL 313.22□□□□□ -0.292e-6■■□□□ 13.9
PRPF8Q6P2Q9 ENTPD5-204ENST00000555829 691 ntTSL 313.17□□□□□ -0.32e-6■■□□□ 13.9
PRPF8Q6P2Q9 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.32e-6■■□□□ 13.9
PRPF8Q6P2Q9 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.13□□□□□ -0.312e-6■■□□□ 13.9
PRPF8Q6P2Q9 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.13□□□□□ -0.312e-6■■□□□ 13.9
PRPF8Q6P2Q9 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.312e-6■■□□□ 13.9
PRPF8Q6P2Q9 SELENOH-202ENST00000528798 469 ntTSL 213.09□□□□□ -0.312e-6■■□□□ 13.9
PRPF8Q6P2Q9 TMEM44-206ENST00000429560 452 ntTSL 1 (best)13.08□□□□□ -0.312e-6■■□□□ 13.9
PRPF8Q6P2Q9 ANP32A-209ENST00000495764 504 ntTSL 513.08□□□□□ -0.322e-6■■□□□ 13.9
PRPF8Q6P2Q9 ZNF142-204ENST00000440934 880 ntTSL 513.07□□□□□ -0.326e-12■■□□□ 13.9
PRPF8Q6P2Q9 GDI1-203ENST00000445564 568 ntTSL 413.07□□□□□ -0.323e-9■■□□□ 13.9
PRPF8Q6P2Q9 GDI1-209ENST00000475976 600 ntTSL 213.07□□□□□ -0.323e-9■■□□□ 13.9
PRPF8Q6P2Q9 TMCO3-209ENST00000619336 575 ntTSL 413.07□□□□□ -0.322e-6■■□□□ 13.9
PRPF8Q6P2Q9 SIDT2-206ENST00000525065 1828 ntTSL 213.06□□□□□ -0.323e-9■■□□□ 13.9
PRPF8Q6P2Q9 CLN6-211ENST00000635754 1441 nt13□□□□□ -0.335e-18■■□□□ 13.9
PRPF8Q6P2Q9 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.342e-6■■□□□ 13.9
PRPF8Q6P2Q9 MPI-217ENST00000567177 1068 ntTSL 312.94□□□□□ -0.343e-8■■□□□ 13.9
PRPF8Q6P2Q9 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.346e-12■■□□□ 13.9
PRPF8Q6P2Q9 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.342e-6■■□□□ 13.9
PRPF8Q6P2Q9 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.353e-9■■□□□ 13.9
PRPF8Q6P2Q9 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.84□□□□□ -0.352e-6■■□□□ 13.9
PRPF8Q6P2Q9 NEU3-202ENST00000526068 431 ntTSL 2 BASIC12.83□□□□□ -0.363e-13■■□□□ 13.9
PRPF8Q6P2Q9 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC12.82□□□□□ -0.365e-6■■□□□ 13.9
PRPF8Q6P2Q9 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.372e-6■■□□□ 13.9
PRPF8Q6P2Q9 COMMD6-208ENST00000471682 447 ntTSL 312.74□□□□□ -0.372e-6■■□□□ 13.9
PRPF8Q6P2Q9 CUL9-205ENST00000502937 556 ntTSL 412.74□□□□□ -0.375e-6■■□□□ 13.9
PRPF8Q6P2Q9 TRMT2A-208ENST00000459644 582 ntTSL 312.72□□□□□ -0.372e-6■■□□□ 13.9
PRPF8Q6P2Q9 RABGAP1-203ENST00000402311 543 ntTSL 412.67□□□□□ -0.382e-6■■□□□ 13.9
PRPF8Q6P2Q9 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.395e-6■■□□□ 13.9
PRPF8Q6P2Q9 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.392e-6■■□□□ 13.9
PRPF8Q6P2Q9 GLS2-209ENST00000486433 2694 ntTSL 1 (best)12.61□□□□□ -0.395e-6■■□□□ 13.9
PRPF8Q6P2Q9 TSC22D4-204ENST00000456330 503 ntTSL 312.59□□□□□ -0.392e-6■■□□□ 13.9
PRPF8Q6P2Q9 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.42e-6■■□□□ 13.9
PRPF8Q6P2Q9 PSEN2-205ENST00000471728 570 ntTSL 312.54□□□□□ -0.42e-6■■□□□ 13.9
PRPF8Q6P2Q9 MPI-210ENST00000564633 583 ntTSL 312.47□□□□□ -0.412e-6■■□□□ 13.9
Retrieved 100 of 73,762 protein–RNA pairs in 1490.3 ms