Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC15.32■□□□□ 0.04
HLA-DRB4X5D2U9 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
HLA-DRB4X5D2U9 AC006128.1-201ENST00000624704 1661 ntBASIC15.32■□□□□ 0.04
HLA-DRB4X5D2U9 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DRB4X5D2U9 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC15.32■□□□□ 0.04
HLA-DRB4X5D2U9 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
HLA-DRB4X5D2U9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DRB4X5D2U9 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
HLA-DRB4X5D2U9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DRB4X5D2U9 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DRB4X5D2U9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DRB4X5D2U9 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC15.32■□□□□ 0.04
HLA-DRB4X5D2U9 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC15.32■□□□□ 0.04
HLA-DRB4X5D2U9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC15.32■□□□□ 0.04
HLA-DRB4X5D2U9 SPI1-203ENST00000533030 661 ntTSL 2 BASIC15.32■□□□□ 0.04
HLA-DRB4X5D2U9 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC15.32■□□□□ 0.04
HLA-DRB4X5D2U9 WWOX-218ENST00000627394 894 ntTSL 5 BASIC15.32■□□□□ 0.04
HLA-DRB4X5D2U9 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DRB4X5D2U9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC15.32■□□□□ 0.04
HLA-DRB4X5D2U9 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC15.32■□□□□ 0.04
HLA-DRB4X5D2U9 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DRB4X5D2U9 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC15.32■□□□□ 0.04
HLA-DRB4X5D2U9 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DRB4X5D2U9 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DRB4X5D2U9 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HLA-DRB4X5D2U9 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DRB4X5D2U9 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
HLA-DRB4X5D2U9 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DRB4X5D2U9 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DRB4X5D2U9 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
HLA-DRB4X5D2U9 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
HLA-DRB4X5D2U9 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
HLA-DRB4X5D2U9 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
HLA-DRB4X5D2U9 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DRB4X5D2U9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DRB4X5D2U9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
HLA-DRB4X5D2U9 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HLA-DRB4X5D2U9 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DRB4X5D2U9 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DRB4X5D2U9 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HLA-DRB4X5D2U9 CD44-222ENST00000526025 1052 ntTSL 2 BASIC15.31■□□□□ 0.04
HLA-DRB4X5D2U9 BRI3-207ENST00000539286 699 ntTSL 2 BASIC15.31■□□□□ 0.04
HLA-DRB4X5D2U9 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC15.31■□□□□ 0.04
HLA-DRB4X5D2U9 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
HLA-DRB4X5D2U9 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DRB4X5D2U9 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DRB4X5D2U9 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC15.31■□□□□ 0.04
HLA-DRB4X5D2U9 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC15.31■□□□□ 0.04
HLA-DRB4X5D2U9 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC15.31■□□□□ 0.04
HLA-DRB4X5D2U9 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC15.31■□□□□ 0.04
HLA-DRB4X5D2U9 AC116050.2-201ENST00000612102 1779 ntBASIC15.31■□□□□ 0.04
HLA-DRB4X5D2U9 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DRB4X5D2U9 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DRB4X5D2U9 PLK5-205ENST00000642079 1969 ntBASIC15.31■□□□□ 0.04
HLA-DRB4X5D2U9 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
HLA-DRB4X5D2U9 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
HLA-DRB4X5D2U9 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DRB4X5D2U9 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DRB4X5D2U9 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DRB4X5D2U9 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DRB4X5D2U9 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DRB4X5D2U9 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DRB4X5D2U9 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DRB4X5D2U9 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DRB4X5D2U9 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DRB4X5D2U9 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
HLA-DRB4X5D2U9 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC15.3■□□□□ 0.04
HLA-DRB4X5D2U9 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DRB4X5D2U9 AC010536.3-201ENST00000620306 533 ntBASIC15.3■□□□□ 0.04
HLA-DRB4X5D2U9 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DRB4X5D2U9 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DRB4X5D2U9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
HLA-DRB4X5D2U9 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DRB4X5D2U9 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DRB4X5D2U9 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DRB4X5D2U9 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
HLA-DRB4X5D2U9 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRB4X5D2U9 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRB4X5D2U9 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRB4X5D2U9 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC15.29■□□□□ 0.04
HLA-DRB4X5D2U9 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRB4X5D2U9 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRB4X5D2U9 AC091799.1-201ENST00000422823 811 ntBASIC15.29■□□□□ 0.04
HLA-DRB4X5D2U9 AC006015.1-201ENST00000429970 570 ntBASIC15.29■□□□□ 0.04
HLA-DRB4X5D2U9 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRB4X5D2U9 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC15.29■□□□□ 0.04
HLA-DRB4X5D2U9 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC15.29■□□□□ 0.04
HLA-DRB4X5D2U9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRB4X5D2U9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRB4X5D2U9 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRB4X5D2U9 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRB4X5D2U9 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC15.29■□□□□ 0.04
HLA-DRB4X5D2U9 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRB4X5D2U9 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC15.29■□□□□ 0.04
HLA-DRB4X5D2U9 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRB4X5D2U9 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRB4X5D2U9 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC15.29■□□□□ 0.04
HLA-DRB4X5D2U9 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC15.29■□□□□ 0.04
HLA-DRB4X5D2U9 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC15.29■□□□□ 0.04
HLA-DRB4X5D2U9 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms