Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
CLIC4Q9Y696 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC23.33■■□□□ 1.32
CLIC4Q9Y696 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC23.33■■□□□ 1.32
CLIC4Q9Y696 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
CLIC4Q9Y696 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CLIC4Q9Y696 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CLIC4Q9Y696 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CLIC4Q9Y696 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC23.32■■□□□ 1.32
CLIC4Q9Y696 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CLIC4Q9Y696 CD44-222ENST00000526025 1052 ntTSL 2 BASIC23.32■■□□□ 1.32
CLIC4Q9Y696 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC23.32■■□□□ 1.32
CLIC4Q9Y696 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
CLIC4Q9Y696 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CLIC4Q9Y696 SMG8-203ENST00000578922 2178 ntBASIC23.32■■□□□ 1.32
CLIC4Q9Y696 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.32■■□□□ 1.32
CLIC4Q9Y696 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CLIC4Q9Y696 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CLIC4Q9Y696 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CLIC4Q9Y696 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CLIC4Q9Y696 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
CLIC4Q9Y696 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC23.31■■□□□ 1.32
CLIC4Q9Y696 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLIC4Q9Y696 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLIC4Q9Y696 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLIC4Q9Y696 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.31■■□□□ 1.32
CLIC4Q9Y696 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.31■■□□□ 1.32
CLIC4Q9Y696 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLIC4Q9Y696 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CLIC4Q9Y696 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
CLIC4Q9Y696 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
CLIC4Q9Y696 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
CLIC4Q9Y696 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLIC4Q9Y696 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLIC4Q9Y696 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CLIC4Q9Y696 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLIC4Q9Y696 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLIC4Q9Y696 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC23.3■■□□□ 1.32
CLIC4Q9Y696 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLIC4Q9Y696 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLIC4Q9Y696 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC23.3■■□□□ 1.32
CLIC4Q9Y696 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLIC4Q9Y696 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.3■■□□□ 1.32
CLIC4Q9Y696 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLIC4Q9Y696 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLIC4Q9Y696 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
CLIC4Q9Y696 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.3■■□□□ 1.32
CLIC4Q9Y696 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLIC4Q9Y696 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLIC4Q9Y696 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC23.3■■□□□ 1.32
CLIC4Q9Y696 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CLIC4Q9Y696 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.3■■□□□ 1.32
CLIC4Q9Y696 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC23.3■■□□□ 1.32
CLIC4Q9Y696 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CLIC4Q9Y696 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
CLIC4Q9Y696 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
CLIC4Q9Y696 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC23.3■■□□□ 1.32
CLIC4Q9Y696 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLIC4Q9Y696 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CLIC4Q9Y696 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLIC4Q9Y696 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
CLIC4Q9Y696 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CLIC4Q9Y696 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CLIC4Q9Y696 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.29■■□□□ 1.32
CLIC4Q9Y696 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC23.29■■□□□ 1.32
CLIC4Q9Y696 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC23.29■■□□□ 1.32
CLIC4Q9Y696 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC23.29■■□□□ 1.32
CLIC4Q9Y696 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.29■■□□□ 1.32
CLIC4Q9Y696 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLIC4Q9Y696 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC23.29■■□□□ 1.32
CLIC4Q9Y696 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLIC4Q9Y696 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLIC4Q9Y696 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLIC4Q9Y696 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLIC4Q9Y696 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC23.28■■□□□ 1.32
CLIC4Q9Y696 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC23.28■■□□□ 1.32
CLIC4Q9Y696 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC23.28■■□□□ 1.32
CLIC4Q9Y696 STX7-201ENST00000367937 1090 ntTSL 5 BASIC23.28■■□□□ 1.32
CLIC4Q9Y696 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.28■■□□□ 1.32
CLIC4Q9Y696 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLIC4Q9Y696 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.28■■□□□ 1.32
CLIC4Q9Y696 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLIC4Q9Y696 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC23.28■■□□□ 1.32
CLIC4Q9Y696 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC23.28■■□□□ 1.32
CLIC4Q9Y696 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
CLIC4Q9Y696 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CLIC4Q9Y696 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
CLIC4Q9Y696 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CLIC4Q9Y696 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CLIC4Q9Y696 KRT8P36-201ENST00000489121 1440 ntBASIC23.27■■□□□ 1.32
CLIC4Q9Y696 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CLIC4Q9Y696 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.27■■□□□ 1.32
CLIC4Q9Y696 DBI-210ENST00000542275 757 ntTSL 5 BASIC23.27■■□□□ 1.32
CLIC4Q9Y696 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC23.27■■□□□ 1.32
CLIC4Q9Y696 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC23.27■■□□□ 1.32
CLIC4Q9Y696 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CLIC4Q9Y696 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CLIC4Q9Y696 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CLIC4Q9Y696 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
CLIC4Q9Y696 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC23.27■■□□□ 1.31
CLIC4Q9Y696 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC23.27■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms