Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP4S1Q9Y587 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP4S1Q9Y587 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP4S1Q9Y587 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP4S1Q9Y587 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP4S1Q9Y587 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP4S1Q9Y587 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP4S1Q9Y587 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP4S1Q9Y587 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP4S1Q9Y587 AC005332.7-201ENST00000614046 2005 ntBASIC19.25■□□□□ 0.67
AP4S1Q9Y587 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.25■□□□□ 0.67
AP4S1Q9Y587 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP4S1Q9Y587 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP4S1Q9Y587 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.25■□□□□ 0.67
AP4S1Q9Y587 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.25■□□□□ 0.67
AP4S1Q9Y587 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP4S1Q9Y587 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
AP4S1Q9Y587 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP4S1Q9Y587 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP4S1Q9Y587 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
AP4S1Q9Y587 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP4S1Q9Y587 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP4S1Q9Y587 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP4S1Q9Y587 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP4S1Q9Y587 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP4S1Q9Y587 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
AP4S1Q9Y587 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP4S1Q9Y587 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
AP4S1Q9Y587 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
AP4S1Q9Y587 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP4S1Q9Y587 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP4S1Q9Y587 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
AP4S1Q9Y587 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.24■□□□□ 0.67
AP4S1Q9Y587 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.24■□□□□ 0.67
AP4S1Q9Y587 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.24■□□□□ 0.67
AP4S1Q9Y587 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP4S1Q9Y587 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
AP4S1Q9Y587 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP4S1Q9Y587 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
AP4S1Q9Y587 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP4S1Q9Y587 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.24■□□□□ 0.67
AP4S1Q9Y587 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.24■□□□□ 0.67
AP4S1Q9Y587 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP4S1Q9Y587 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP4S1Q9Y587 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP4S1Q9Y587 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP4S1Q9Y587 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
AP4S1Q9Y587 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP4S1Q9Y587 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
AP4S1Q9Y587 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.23■□□□□ 0.67
AP4S1Q9Y587 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP4S1Q9Y587 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
AP4S1Q9Y587 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.23■□□□□ 0.67
AP4S1Q9Y587 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.23■□□□□ 0.67
AP4S1Q9Y587 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
AP4S1Q9Y587 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP4S1Q9Y587 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP4S1Q9Y587 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.23■□□□□ 0.67
AP4S1Q9Y587 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP4S1Q9Y587 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP4S1Q9Y587 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.23■□□□□ 0.67
AP4S1Q9Y587 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP4S1Q9Y587 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP4S1Q9Y587 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
AP4S1Q9Y587 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP4S1Q9Y587 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.23■□□□□ 0.67
AP4S1Q9Y587 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
AP4S1Q9Y587 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP4S1Q9Y587 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
AP4S1Q9Y587 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP4S1Q9Y587 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
AP4S1Q9Y587 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
AP4S1Q9Y587 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP4S1Q9Y587 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP4S1Q9Y587 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP4S1Q9Y587 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.22■□□□□ 0.67
AP4S1Q9Y587 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
AP4S1Q9Y587 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.22■□□□□ 0.67
AP4S1Q9Y587 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
AP4S1Q9Y587 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
AP4S1Q9Y587 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
AP4S1Q9Y587 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP4S1Q9Y587 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
AP4S1Q9Y587 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP4S1Q9Y587 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
AP4S1Q9Y587 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP4S1Q9Y587 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP4S1Q9Y587 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP4S1Q9Y587 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
AP4S1Q9Y587 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
AP4S1Q9Y587 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.21■□□□□ 0.67
AP4S1Q9Y587 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP4S1Q9Y587 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP4S1Q9Y587 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP4S1Q9Y587 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.21■□□□□ 0.67
AP4S1Q9Y587 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.21■□□□□ 0.67
AP4S1Q9Y587 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.21■□□□□ 0.67
AP4S1Q9Y587 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.21■□□□□ 0.67
AP4S1Q9Y587 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP4S1Q9Y587 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms