Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC24.89■■□□□ 1.58
ZC3H4Q9UPT8 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC24.89■■□□□ 1.58
ZC3H4Q9UPT8 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC24.89■■□□□ 1.58
ZC3H4Q9UPT8 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC24.89■■□□□ 1.58
ZC3H4Q9UPT8 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.89■■□□□ 1.58
ZC3H4Q9UPT8 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
ZC3H4Q9UPT8 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC24.89■■□□□ 1.57
ZC3H4Q9UPT8 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
ZC3H4Q9UPT8 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
ZC3H4Q9UPT8 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
ZC3H4Q9UPT8 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC24.89■■□□□ 1.57
ZC3H4Q9UPT8 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
ZC3H4Q9UPT8 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
ZC3H4Q9UPT8 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
ZC3H4Q9UPT8 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
ZC3H4Q9UPT8 MIR1238-201ENST00000408483 83 ntBASIC24.88■■□□□ 1.57
ZC3H4Q9UPT8 PGM5P4-201ENST00000421970 445 ntBASIC24.88■■□□□ 1.57
ZC3H4Q9UPT8 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC24.88■■□□□ 1.57
ZC3H4Q9UPT8 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC24.88■■□□□ 1.57
ZC3H4Q9UPT8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC24.88■■□□□ 1.57
ZC3H4Q9UPT8 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
ZC3H4Q9UPT8 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
ZC3H4Q9UPT8 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
ZC3H4Q9UPT8 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
ZC3H4Q9UPT8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
ZC3H4Q9UPT8 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
ZC3H4Q9UPT8 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
ZC3H4Q9UPT8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
ZC3H4Q9UPT8 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
ZC3H4Q9UPT8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC24.87■■□□□ 1.57
ZC3H4Q9UPT8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC24.87■■□□□ 1.57
ZC3H4Q9UPT8 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
ZC3H4Q9UPT8 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
ZC3H4Q9UPT8 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC24.87■■□□□ 1.57
ZC3H4Q9UPT8 FDX2-207ENST00000494368 584 ntTSL 4 BASIC24.87■■□□□ 1.57
ZC3H4Q9UPT8 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
ZC3H4Q9UPT8 FITM1-202ENST00000559294 800 ntBASIC24.87■■□□□ 1.57
ZC3H4Q9UPT8 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
ZC3H4Q9UPT8 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC24.87■■□□□ 1.57
ZC3H4Q9UPT8 USF2-205ENST00000594064 1179 ntTSL 2 BASIC24.87■■□□□ 1.57
ZC3H4Q9UPT8 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC24.87■■□□□ 1.57
ZC3H4Q9UPT8 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC24.87■■□□□ 1.57
ZC3H4Q9UPT8 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
ZC3H4Q9UPT8 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC24.87■■□□□ 1.57
ZC3H4Q9UPT8 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
ZC3H4Q9UPT8 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
ZC3H4Q9UPT8 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.87■■□□□ 1.57
ZC3H4Q9UPT8 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
ZC3H4Q9UPT8 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
ZC3H4Q9UPT8 AC104076.2-201ENST00000448912 469 ntBASIC24.86■■□□□ 1.57
ZC3H4Q9UPT8 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC24.86■■□□□ 1.57
ZC3H4Q9UPT8 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC24.86■■□□□ 1.57
ZC3H4Q9UPT8 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
ZC3H4Q9UPT8 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC24.86■■□□□ 1.57
ZC3H4Q9UPT8 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
ZC3H4Q9UPT8 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC24.86■■□□□ 1.57
ZC3H4Q9UPT8 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC24.86■■□□□ 1.57
ZC3H4Q9UPT8 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
ZC3H4Q9UPT8 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
ZC3H4Q9UPT8 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
ZC3H4Q9UPT8 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
ZC3H4Q9UPT8 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC24.86■■□□□ 1.57
ZC3H4Q9UPT8 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC24.86■■□□□ 1.57
ZC3H4Q9UPT8 AC116050.2-201ENST00000612102 1779 ntBASIC24.86■■□□□ 1.57
ZC3H4Q9UPT8 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
ZC3H4Q9UPT8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
ZC3H4Q9UPT8 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC24.86■■□□□ 1.57
ZC3H4Q9UPT8 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC24.86■■□□□ 1.57
ZC3H4Q9UPT8 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC24.86■■□□□ 1.57
ZC3H4Q9UPT8 AC010947.1-201ENST00000623454 693 ntBASIC24.86■■□□□ 1.57
ZC3H4Q9UPT8 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
ZC3H4Q9UPT8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
ZC3H4Q9UPT8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
ZC3H4Q9UPT8 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
ZC3H4Q9UPT8 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC24.85■■□□□ 1.57
ZC3H4Q9UPT8 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC24.85■■□□□ 1.57
ZC3H4Q9UPT8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC24.85■■□□□ 1.57
ZC3H4Q9UPT8 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
ZC3H4Q9UPT8 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC24.85■■□□□ 1.57
ZC3H4Q9UPT8 C11orf96-202ENST00000528572 1834 ntBASIC24.85■■□□□ 1.57
ZC3H4Q9UPT8 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
ZC3H4Q9UPT8 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
ZC3H4Q9UPT8 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC24.85■■□□□ 1.57
ZC3H4Q9UPT8 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
ZC3H4Q9UPT8 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
ZC3H4Q9UPT8 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC24.84■■□□□ 1.57
ZC3H4Q9UPT8 AC139530.1-201ENST00000575312 1977 ntBASIC24.84■■□□□ 1.57
ZC3H4Q9UPT8 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC24.84■■□□□ 1.57
ZC3H4Q9UPT8 CLDN5-201ENST00000403084 2357 ntBASIC24.84■■□□□ 1.57
ZC3H4Q9UPT8 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
ZC3H4Q9UPT8 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC24.84■■□□□ 1.57
ZC3H4Q9UPT8 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC24.84■■□□□ 1.57
ZC3H4Q9UPT8 AC091076.1-201ENST00000610741 619 ntBASIC24.84■■□□□ 1.57
ZC3H4Q9UPT8 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
ZC3H4Q9UPT8 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
ZC3H4Q9UPT8 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
ZC3H4Q9UPT8 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC24.83■■□□□ 1.56
ZC3H4Q9UPT8 TPM4P1-201ENST00000436100 807 ntBASIC24.83■■□□□ 1.56
ZC3H4Q9UPT8 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
ZC3H4Q9UPT8 TMA16-209ENST00000513272 803 ntTSL 2 BASIC24.83■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms