Protein–RNA interactions for Protein: Q9UNH7

SNX6, Sorting nexin-6, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6Q9UNH7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX6Q9UNH7 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX6Q9UNH7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX6Q9UNH7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SNX6Q9UNH7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.72■□□□□ 0.75
SNX6Q9UNH7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX6Q9UNH7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SNX6Q9UNH7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX6Q9UNH7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.72■□□□□ 0.75
SNX6Q9UNH7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
SNX6Q9UNH7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SNX6Q9UNH7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX6Q9UNH7 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX6Q9UNH7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SNX6Q9UNH7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX6Q9UNH7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX6Q9UNH7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.72■□□□□ 0.75
SNX6Q9UNH7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.72■□□□□ 0.75
SNX6Q9UNH7 AC034268.1-201ENST00000441047 882 ntBASIC19.72■□□□□ 0.75
SNX6Q9UNH7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.72■□□□□ 0.75
SNX6Q9UNH7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.72■□□□□ 0.75
SNX6Q9UNH7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.72■□□□□ 0.75
SNX6Q9UNH7 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
SNX6Q9UNH7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.72■□□□□ 0.75
SNX6Q9UNH7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX6Q9UNH7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX6Q9UNH7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNX6Q9UNH7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNX6Q9UNH7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNX6Q9UNH7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.71■□□□□ 0.75
SNX6Q9UNH7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SNX6Q9UNH7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SNX6Q9UNH7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SNX6Q9UNH7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNX6Q9UNH7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNX6Q9UNH7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNX6Q9UNH7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SNX6Q9UNH7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNX6Q9UNH7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SNX6Q9UNH7 UBE2DNL-204ENST00000602536 740 ntBASIC19.71■□□□□ 0.75
SNX6Q9UNH7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.71■□□□□ 0.75
SNX6Q9UNH7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SNX6Q9UNH7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.71■□□□□ 0.75
SNX6Q9UNH7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SNX6Q9UNH7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SNX6Q9UNH7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.71■□□□□ 0.75
SNX6Q9UNH7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNX6Q9UNH7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNX6Q9UNH7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SNX6Q9UNH7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SNX6Q9UNH7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.7■□□□□ 0.74
SNX6Q9UNH7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.7■□□□□ 0.74
SNX6Q9UNH7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX6Q9UNH7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SNX6Q9UNH7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX6Q9UNH7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SNX6Q9UNH7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
SNX6Q9UNH7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX6Q9UNH7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX6Q9UNH7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX6Q9UNH7 CDV3P1-201ENST00000471403 739 ntBASIC19.7■□□□□ 0.74
SNX6Q9UNH7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.7■□□□□ 0.74
SNX6Q9UNH7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SNX6Q9UNH7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.7■□□□□ 0.74
SNX6Q9UNH7 KRT18P61-201ENST00000585825 1298 ntBASIC19.7■□□□□ 0.74
SNX6Q9UNH7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.7■□□□□ 0.74
SNX6Q9UNH7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.7■□□□□ 0.74
SNX6Q9UNH7 NTF6G-201ENST00000591094 616 ntBASIC19.7■□□□□ 0.74
SNX6Q9UNH7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SNX6Q9UNH7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SNX6Q9UNH7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX6Q9UNH7 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.7■□□□□ 0.74
SNX6Q9UNH7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SNX6Q9UNH7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.7■□□□□ 0.74
SNX6Q9UNH7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.7■□□□□ 0.74
SNX6Q9UNH7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX6Q9UNH7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SNX6Q9UNH7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX6Q9UNH7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SNX6Q9UNH7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX6Q9UNH7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SNX6Q9UNH7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX6Q9UNH7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SNX6Q9UNH7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SNX6Q9UNH7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SNX6Q9UNH7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.69■□□□□ 0.74
SNX6Q9UNH7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX6Q9UNH7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.69■□□□□ 0.74
SNX6Q9UNH7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SNX6Q9UNH7 AC097381.1-201ENST00000429019 1296 ntBASIC19.69■□□□□ 0.74
SNX6Q9UNH7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.69■□□□□ 0.74
SNX6Q9UNH7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.69■□□□□ 0.74
SNX6Q9UNH7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SNX6Q9UNH7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX6Q9UNH7 MYCNOS-205ENST00000641950 531 ntBASIC19.69■□□□□ 0.74
SNX6Q9UNH7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.69■□□□□ 0.74
SNX6Q9UNH7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX6Q9UNH7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.69■□□□□ 0.74
SNX6Q9UNH7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SNX6Q9UNH7 AL162377.1-201ENST00000618844 1793 ntBASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms