Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
COMMD9Q9P000 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COMMD9Q9P000 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD9Q9P000 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD9Q9P000 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD9Q9P000 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD9Q9P000 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD9Q9P000 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.34■□□□□ 0.37
COMMD9Q9P000 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.34■□□□□ 0.37
COMMD9Q9P000 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD9Q9P000 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD9Q9P000 GUSBP5-201ENST00000418136 578 ntBASIC17.34■□□□□ 0.37
COMMD9Q9P000 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD9Q9P000 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
COMMD9Q9P000 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
COMMD9Q9P000 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.34■□□□□ 0.37
COMMD9Q9P000 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.34■□□□□ 0.37
COMMD9Q9P000 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.34■□□□□ 0.37
COMMD9Q9P000 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD9Q9P000 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.34■□□□□ 0.37
COMMD9Q9P000 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
COMMD9Q9P000 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.34■□□□□ 0.37
COMMD9Q9P000 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD9Q9P000 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD9Q9P000 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD9Q9P000 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
COMMD9Q9P000 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COMMD9Q9P000 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COMMD9Q9P000 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COMMD9Q9P000 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COMMD9Q9P000 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COMMD9Q9P000 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.33■□□□□ 0.37
COMMD9Q9P000 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COMMD9Q9P000 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
COMMD9Q9P000 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.33■□□□□ 0.37
COMMD9Q9P000 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COMMD9Q9P000 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
COMMD9Q9P000 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.33■□□□□ 0.36
COMMD9Q9P000 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
COMMD9Q9P000 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
COMMD9Q9P000 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COMMD9Q9P000 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COMMD9Q9P000 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COMMD9Q9P000 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
COMMD9Q9P000 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.33■□□□□ 0.36
COMMD9Q9P000 PLK5-205ENST00000642079 1969 ntBASIC17.33■□□□□ 0.36
COMMD9Q9P000 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.33■□□□□ 0.36
COMMD9Q9P000 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COMMD9Q9P000 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COMMD9Q9P000 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.32■□□□□ 0.36
COMMD9Q9P000 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD9Q9P000 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD9Q9P000 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
COMMD9Q9P000 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD9Q9P000 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.32■□□□□ 0.36
COMMD9Q9P000 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD9Q9P000 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD9Q9P000 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
COMMD9Q9P000 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD9Q9P000 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.32■□□□□ 0.36
COMMD9Q9P000 AL138724.1-201ENST00000606771 1088 ntBASIC17.32■□□□□ 0.36
COMMD9Q9P000 AC112907.3-201ENST00000577781 2400 ntBASIC17.32■□□□□ 0.36
COMMD9Q9P000 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD9Q9P000 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.32■□□□□ 0.36
COMMD9Q9P000 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.32■□□□□ 0.36
COMMD9Q9P000 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD9Q9P000 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD9Q9P000 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD9Q9P000 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD9Q9P000 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD9Q9P000 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD9Q9P000 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD9Q9P000 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD9Q9P000 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD9Q9P000 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD9Q9P000 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD9Q9P000 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD9Q9P000 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.31■□□□□ 0.36
COMMD9Q9P000 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
COMMD9Q9P000 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD9Q9P000 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
COMMD9Q9P000 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.31■□□□□ 0.36
COMMD9Q9P000 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
COMMD9Q9P000 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
COMMD9Q9P000 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD9Q9P000 AC098818.2-201ENST00000564925 2320 ntBASIC17.31■□□□□ 0.36
COMMD9Q9P000 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD9Q9P000 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD9Q9P000 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD9Q9P000 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD9Q9P000 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.3■□□□□ 0.36
COMMD9Q9P000 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
COMMD9Q9P000 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.3■□□□□ 0.36
COMMD9Q9P000 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD9Q9P000 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD9Q9P000 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD9Q9P000 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
COMMD9Q9P000 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
COMMD9Q9P000 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD9Q9P000 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms