Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RC3H2Q9HBD1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RC3H2Q9HBD1 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
RC3H2Q9HBD1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RC3H2Q9HBD1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RC3H2Q9HBD1 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.95■■□□□ 1.1
RC3H2Q9HBD1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.95■■□□□ 1.1
RC3H2Q9HBD1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RC3H2Q9HBD1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RC3H2Q9HBD1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RC3H2Q9HBD1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.94■■□□□ 1.1
RC3H2Q9HBD1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
RC3H2Q9HBD1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RC3H2Q9HBD1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
RC3H2Q9HBD1 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RC3H2Q9HBD1 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.94■■□□□ 1.1
RC3H2Q9HBD1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.94■■□□□ 1.1
RC3H2Q9HBD1 AC133561.5-201ENST00000635547 218 ntBASIC21.94■■□□□ 1.1
RC3H2Q9HBD1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.94■■□□□ 1.1
RC3H2Q9HBD1 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RC3H2Q9HBD1 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
RC3H2Q9HBD1 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RC3H2Q9HBD1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RC3H2Q9HBD1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.94■■□□□ 1.1
RC3H2Q9HBD1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
RC3H2Q9HBD1 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.94■■□□□ 1.1
RC3H2Q9HBD1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RC3H2Q9HBD1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RC3H2Q9HBD1 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RC3H2Q9HBD1 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.93■■□□□ 1.1
RC3H2Q9HBD1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RC3H2Q9HBD1 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.93■■□□□ 1.1
RC3H2Q9HBD1 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RC3H2Q9HBD1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.93■■□□□ 1.1
RC3H2Q9HBD1 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.93■■□□□ 1.1
RC3H2Q9HBD1 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.93■■□□□ 1.1
RC3H2Q9HBD1 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.93■■□□□ 1.1
RC3H2Q9HBD1 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RC3H2Q9HBD1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.93■■□□□ 1.1
RC3H2Q9HBD1 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RC3H2Q9HBD1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RC3H2Q9HBD1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RC3H2Q9HBD1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RC3H2Q9HBD1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RC3H2Q9HBD1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RC3H2Q9HBD1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.92■■□□□ 1.1
RC3H2Q9HBD1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
RC3H2Q9HBD1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
RC3H2Q9HBD1 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
RC3H2Q9HBD1 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RC3H2Q9HBD1 RCN1P1-201ENST00000400413 996 ntBASIC21.92■■□□□ 1.1
RC3H2Q9HBD1 AL390719.1-204ENST00000412397 1219 ntBASIC21.92■■□□□ 1.1
RC3H2Q9HBD1 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.92■■□□□ 1.1
RC3H2Q9HBD1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.92■■□□□ 1.1
RC3H2Q9HBD1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.92■■□□□ 1.1
RC3H2Q9HBD1 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.92■■□□□ 1.1
RC3H2Q9HBD1 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.92■■□□□ 1.1
RC3H2Q9HBD1 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.92■■□□□ 1.1
RC3H2Q9HBD1 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.92■■□□□ 1.1
RC3H2Q9HBD1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RC3H2Q9HBD1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RC3H2Q9HBD1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.92■■□□□ 1.1
RC3H2Q9HBD1 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RC3H2Q9HBD1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RC3H2Q9HBD1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RC3H2Q9HBD1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RC3H2Q9HBD1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RC3H2Q9HBD1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RC3H2Q9HBD1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RC3H2Q9HBD1 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RC3H2Q9HBD1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RC3H2Q9HBD1 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.91■■□□□ 1.1
RC3H2Q9HBD1 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
RC3H2Q9HBD1 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RC3H2Q9HBD1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RC3H2Q9HBD1 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RC3H2Q9HBD1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RC3H2Q9HBD1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RC3H2Q9HBD1 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RC3H2Q9HBD1 AC242852.2-201ENST00000615738 1807 ntBASIC21.9■■□□□ 1.1
RC3H2Q9HBD1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RC3H2Q9HBD1 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RC3H2Q9HBD1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
RC3H2Q9HBD1 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RC3H2Q9HBD1 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RC3H2Q9HBD1 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.9■■□□□ 1.1
RC3H2Q9HBD1 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.9■■□□□ 1.1
RC3H2Q9HBD1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.9■■□□□ 1.1
RC3H2Q9HBD1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.9■■□□□ 1.1
RC3H2Q9HBD1 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.9■■□□□ 1.1
RC3H2Q9HBD1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RC3H2Q9HBD1 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RC3H2Q9HBD1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.9■■□□□ 1.1
RC3H2Q9HBD1 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RC3H2Q9HBD1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.9■■□□□ 1.1
RC3H2Q9HBD1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
RC3H2Q9HBD1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RC3H2Q9HBD1 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RC3H2Q9HBD1 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
RC3H2Q9HBD1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms