Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEC61A2Q9H9S3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SEC61A2Q9H9S3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.26■□□□□ 0.51
SEC61A2Q9H9S3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SEC61A2Q9H9S3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.26■□□□□ 0.51
SEC61A2Q9H9S3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.26■□□□□ 0.51
SEC61A2Q9H9S3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEC61A2Q9H9S3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.26■□□□□ 0.51
SEC61A2Q9H9S3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEC61A2Q9H9S3 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SEC61A2Q9H9S3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.26■□□□□ 0.51
SEC61A2Q9H9S3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.26■□□□□ 0.51
SEC61A2Q9H9S3 AC090192.1-201ENST00000517740 490 ntBASIC18.26■□□□□ 0.51
SEC61A2Q9H9S3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.26■□□□□ 0.51
SEC61A2Q9H9S3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.26■□□□□ 0.51
SEC61A2Q9H9S3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.26■□□□□ 0.51
SEC61A2Q9H9S3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.26■□□□□ 0.51
SEC61A2Q9H9S3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.26■□□□□ 0.51
SEC61A2Q9H9S3 AC073111.5-205ENST00000641717 521 ntBASIC18.26■□□□□ 0.51
SEC61A2Q9H9S3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SEC61A2Q9H9S3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEC61A2Q9H9S3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEC61A2Q9H9S3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEC61A2Q9H9S3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEC61A2Q9H9S3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SEC61A2Q9H9S3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEC61A2Q9H9S3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.26■□□□□ 0.51
SEC61A2Q9H9S3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.26■□□□□ 0.51
SEC61A2Q9H9S3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.26■□□□□ 0.51
SEC61A2Q9H9S3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SEC61A2Q9H9S3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SEC61A2Q9H9S3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SEC61A2Q9H9S3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SEC61A2Q9H9S3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SEC61A2Q9H9S3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
SEC61A2Q9H9S3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SEC61A2Q9H9S3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SEC61A2Q9H9S3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SEC61A2Q9H9S3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SEC61A2Q9H9S3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SEC61A2Q9H9S3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SEC61A2Q9H9S3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SEC61A2Q9H9S3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.25■□□□□ 0.51
SEC61A2Q9H9S3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SEC61A2Q9H9S3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SEC61A2Q9H9S3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SEC61A2Q9H9S3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SEC61A2Q9H9S3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
SEC61A2Q9H9S3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SEC61A2Q9H9S3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SEC61A2Q9H9S3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SEC61A2Q9H9S3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SEC61A2Q9H9S3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SEC61A2Q9H9S3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SEC61A2Q9H9S3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.24■□□□□ 0.51
SEC61A2Q9H9S3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SEC61A2Q9H9S3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SEC61A2Q9H9S3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.24■□□□□ 0.51
SEC61A2Q9H9S3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SEC61A2Q9H9S3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SEC61A2Q9H9S3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SEC61A2Q9H9S3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.24■□□□□ 0.51
SEC61A2Q9H9S3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SEC61A2Q9H9S3 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.24■□□□□ 0.51
SEC61A2Q9H9S3 KRT18P11-201ENST00000435214 1283 ntBASIC18.24■□□□□ 0.51
SEC61A2Q9H9S3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SEC61A2Q9H9S3 CDCA4P2-201ENST00000441182 718 ntBASIC18.24■□□□□ 0.51
SEC61A2Q9H9S3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.24■□□□□ 0.51
SEC61A2Q9H9S3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.24■□□□□ 0.51
SEC61A2Q9H9S3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.24■□□□□ 0.51
SEC61A2Q9H9S3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
SEC61A2Q9H9S3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SEC61A2Q9H9S3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SEC61A2Q9H9S3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SEC61A2Q9H9S3 FP700111.2-201ENST00000619190 1892 ntBASIC18.24■□□□□ 0.51
SEC61A2Q9H9S3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
SEC61A2Q9H9S3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SEC61A2Q9H9S3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SEC61A2Q9H9S3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SEC61A2Q9H9S3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SEC61A2Q9H9S3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SEC61A2Q9H9S3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SEC61A2Q9H9S3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SEC61A2Q9H9S3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SEC61A2Q9H9S3 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.23■□□□□ 0.51
SEC61A2Q9H9S3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.23■□□□□ 0.51
SEC61A2Q9H9S3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SEC61A2Q9H9S3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.23■□□□□ 0.51
SEC61A2Q9H9S3 RAP2CP1-201ENST00000605103 478 ntBASIC18.23■□□□□ 0.51
SEC61A2Q9H9S3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SEC61A2Q9H9S3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SEC61A2Q9H9S3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SEC61A2Q9H9S3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SEC61A2Q9H9S3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SEC61A2Q9H9S3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SEC61A2Q9H9S3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SEC61A2Q9H9S3 FEM1AP1-201ENST00000431297 1995 ntBASIC18.22■□□□□ 0.51
SEC61A2Q9H9S3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.22■□□□□ 0.51
SEC61A2Q9H9S3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SEC61A2Q9H9S3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms