Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC25.94■■□□□ 1.742e-6■■■■□ 21.1
CSTF2TQ9H0L4 AL355987.4-202ENST00000459985 1900 ntTSL 220.86■□□□□ 0.932e-6■■■■□ 21.1
CSTF2TQ9H0L4 SRCAP-203ENST00000411466 836 ntTSL 320.68■□□□□ 0.92e-6■■■■□ 21.1
CSTF2TQ9H0L4 SIX5-202ENST00000560160 1809 ntAPPRIS ALT2 TSL 219.9■□□□□ 0.782e-6■■■■□ 21.1
CSTF2TQ9H0L4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.81■□□□□ 0.762e-6■■■■□ 21.1
CSTF2TQ9H0L4 AL391422.3-201ENST00000603791 2761 ntBASIC19.2■□□□□ 0.662e-6■■■■□ 21.1
CSTF2TQ9H0L4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.572e-6■■■■□ 21.1
CSTF2TQ9H0L4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.562e-6■■■■□ 21.1
CSTF2TQ9H0L4 CCDC183-206ENST00000484858 422 ntTSL 317.87■□□□□ 0.452e-6■■■■□ 21.1
CSTF2TQ9H0L4 TERT-203ENST00000460137 2992 ntTSL 1 (best)17.3■□□□□ 0.362e-6■■■■□ 21.1
CSTF2TQ9H0L4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.02■□□□□ 0.322e-6■■■■□ 21.1
CSTF2TQ9H0L4 ALDOA-224ENST00000568435 935 ntTSL 1 (best)15.83■□□□□ 0.122e-6■■■■□ 21.1
CSTF2TQ9H0L4 BANP-209ENST00000439677 736 ntTSL 515.65■□□□□ 0.12e-6■■■■□ 21.1
CSTF2TQ9H0L4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.092e-6■■■■□ 21.1
CSTF2TQ9H0L4 TERT-204ENST00000484238 2422 ntTSL 515.26■□□□□ 0.032e-6■■■■□ 21.1
CSTF2TQ9H0L4 CCDC183-207ENST00000496839 744 ntTSL 514.31□□□□□ -0.122e-6■■■■□ 21.1
CSTF2TQ9H0L4 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.23□□□□□ -0.132e-6■■■■□ 21.1
CSTF2TQ9H0L4 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.152e-6■■■■□ 21.1
CSTF2TQ9H0L4 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.162e-6■■■■□ 21.1
CSTF2TQ9H0L4 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.182e-6■■■■□ 21.1
CSTF2TQ9H0L4 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.262e-6■■■■□ 21.1
CSTF2TQ9H0L4 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.372e-6■■■■□ 21.1
CSTF2TQ9H0L4 ALDOA-210ENST00000563987 586 ntTSL 210.19□□□□□ -0.782e-6■■■■□ 21.1
CSTF2TQ9H0L4 TBCK-204ENST00000394708 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.833e-6■■■■□ 21.1
CSTF2TQ9H0L4 ALDOA-205ENST00000562168 666 ntTSL 39.43□□□□□ -0.92e-6■■■■□ 21.1
CSTF2TQ9H0L4 TBCK-202ENST00000361687 3312 ntTSL 1 (best) BASIC8.72□□□□□ -1.013e-6■■■■□ 21.1
CSTF2TQ9H0L4 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.043e-6■■■■□ 21.1
CSTF2TQ9H0L4 TBCK-203ENST00000394706 3349 ntTSL 1 (best) BASIC8.33□□□□□ -1.083e-6■■■■□ 21.1
CSTF2TQ9H0L4 AC116050.1-201ENST00000609777 1194 ntTSL 1 (best) BASIC7.9□□□□□ -1.142e-6■■■■□ 21.1
CSTF2TQ9H0L4 TBCK-206ENST00000467183 3566 ntTSL 1 (best)7.8□□□□□ -1.163e-6■■■■□ 21.1
CSTF2TQ9H0L4 PPP1R37-208ENST00000545910 303 ntTSL 37.62□□□□□ -1.192e-6■■■■□ 21.1
CSTF2TQ9H0L4 TBCK-217ENST00000510927 2826 ntTSL 26.23□□□□□ -1.413e-6■■■■□ 21.1
CSTF2TQ9H0L4 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.573e-6■■■■□ 21.1
CSTF2TQ9H0L4 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.07□□□□□ -1.67e-12■■■■□ 21.1
CSTF2TQ9H0L4 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.222e-6■■■■□ 21.1
CSTF2TQ9H0L4 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.222e-6■■■■□ 21.1
CSTF2TQ9H0L4 LMBR1-209ENST00000434453 2229 ntTSL 522.85■■□□□ 1.253e-8■■■■□ 21.1
CSTF2TQ9H0L4 LMBR1-214ENST00000461469 560 ntTSL 322.11■■□□□ 1.133e-8■■■■□ 21.1
CSTF2TQ9H0L4 LMBR1-211ENST00000444719 762 ntTSL 320.94■□□□□ 0.943e-8■■■■□ 21.1
CSTF2TQ9H0L4 LMBR1-205ENST00000430278 523 ntTSL 419.61■□□□□ 0.733e-8■■■■□ 21.1
CSTF2TQ9H0L4 LMBR1-207ENST00000433968 578 ntTSL 419.61■□□□□ 0.733e-8■■■■□ 21.1
CSTF2TQ9H0L4 LMBR1-203ENST00000414218 451 ntTSL 519.46■□□□□ 0.713e-8■■■■□ 21.1
CSTF2TQ9H0L4 LMBR1-219ENST00000498034 478 ntTSL 319.2■□□□□ 0.663e-8■■■■□ 21.1
CSTF2TQ9H0L4 LMBR1-208ENST00000434278 678 ntTSL 518.97■□□□□ 0.633e-8■■■■□ 21.1
CSTF2TQ9H0L4 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.092e-6■■■■□ 21.1
CSTF2TQ9H0L4 BCOR-207ENST00000412952 288 ntTSL 512.22□□□□□ -0.458e-7■■■■□ 21.1
CSTF2TQ9H0L4 BCOR-201ENST00000342274 6390 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.81e-6■■■■□ 21.1
CSTF2TQ9H0L4 BCOR-206ENST00000406200 4216 ntTSL 28.89□□□□□ -0.991e-6■■■■□ 21.1
CSTF2TQ9H0L4 BCOR-203ENST00000378455 6338 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -11e-6■■■■□ 21.1
CSTF2TQ9H0L4 IFT140-206ENST00000565298 4727 ntTSL 218.41■□□□□ 0.544e-6■■■■□ 21.1
CSTF2TQ9H0L4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.094e-6■■■■□ 21.1
CSTF2TQ9H0L4 IFT140-202ENST00000397417 4023 ntTSL 510.48□□□□□ -0.734e-6■■■■□ 21.1
CSTF2TQ9H0L4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.523e-7■■■■□ 21.1
CSTF2TQ9H0L4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.99■□□□□ 0.473e-7■■■■□ 21.1
CSTF2TQ9H0L4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.24■□□□□ 0.192e-6■■■■□ 21.1
CSTF2TQ9H0L4 RUVBL1-203ENST00000472125 913 ntTSL 310.13□□□□□ -0.792e-6■■■■□ 21.1
CSTF2TQ9H0L4 RUVBL1-208ENST00000585057 1113 ntTSL 39.91□□□□□ -0.822e-6■■■■□ 21.1
CSTF2TQ9H0L4 IFITM10-202ENST00000382123 3807 ntTSL 312.86□□□□□ -0.351e-6■■■■□ 21
CSTF2TQ9H0L4 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.351e-6■■■■□ 21
CSTF2TQ9H0L4 IL4R-205ENST00000561946 611 ntTSL 310.82□□□□□ -0.686e-7■■■■□ 21
CSTF2TQ9H0L4 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.184e-7■■■■□ 21
CSTF2TQ9H0L4 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.086e-8■■■■□ 21
CSTF2TQ9H0L4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC22.01■■□□□ 1.117e-8■■■■□ 21
CSTF2TQ9H0L4 CSRNP2-208ENST00000552899 449 ntTSL 410.02□□□□□ -0.816e-8■■■■□ 21
CSTF2TQ9H0L4 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.38□□□□□ -0.271e-6■■■■□ 21
CSTF2TQ9H0L4 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.082e-6■■■■□ 21
CSTF2TQ9H0L4 COQ8A-204ENST00000476488 264 ntTSL 313.28□□□□□ -0.284e-8■■■■□ 21
CSTF2TQ9H0L4 PTMA-208ENST00000448874 1108 ntTSL 215.76■□□□□ 0.112e-7■■■■□ 21
CSTF2TQ9H0L4 PTMA-212ENST00000481928 1635 ntTSL 315.32■□□□□ 0.042e-7■■■■□ 21
CSTF2TQ9H0L4 PTMA-211ENST00000468027 621 ntTSL 1 (best)12.05□□□□□ -0.482e-7■■■■□ 21
CSTF2TQ9H0L4 PTMA-209ENST00000466801 784 ntTSL 59.93□□□□□ -0.822e-7■■■■□ 21
CSTF2TQ9H0L4 PTMA-202ENST00000409115 1221 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.832e-7■■■■□ 21
CSTF2TQ9H0L4 PTMA-204ENST00000409683 933 ntAPPRIS ALT1 TSL 3 BASIC9.66□□□□□ -0.862e-7■■■■□ 21
CSTF2TQ9H0L4 PTMA-201ENST00000341369 1212 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.872e-7■■■■□ 21
CSTF2TQ9H0L4 PTMA-203ENST00000409321 735 ntTSL 3 BASIC9.54□□□□□ -0.882e-7■■■■□ 21
CSTF2TQ9H0L4 STMN3-204ENST00000632676 519 ntTSL 412.54□□□□□ -0.43e-7■■■■□ 21
CSTF2TQ9H0L4 TRABD-205ENST00000463233 2404 ntTSL 1 (best)18.37■□□□□ 0.531e-6■■■■□ 21
CSTF2TQ9H0L4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.511e-6■■■■□ 21
CSTF2TQ9H0L4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.211e-6■■■■□ 21
CSTF2TQ9H0L4 CDCA2-204ENST00000521098 2409 ntTSL 55.35□□□□□ -1.556e-7■■■■□ 21
CSTF2TQ9H0L4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.034e-7■■■■□ 21
CSTF2TQ9H0L4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.743e-7■■■■□ 21
CSTF2TQ9H0L4 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.082e-7■■■■□ 21
CSTF2TQ9H0L4 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.042e-7■■■■□ 21
CSTF2TQ9H0L4 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.233e-7■■■■□ 21
CSTF2TQ9H0L4 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.172e-6■■■■□ 21
CSTF2TQ9H0L4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.422e-6■■■■□ 21
CSTF2TQ9H0L4 AKAP17A-203ENST00000474361 3232 ntTSL 1 (best)17.09■□□□□ 0.332e-6■■■■□ 21
CSTF2TQ9H0L4 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.14e-7■■■■□ 21
CSTF2TQ9H0L4 KLF11-204ENST00000448523 559 ntTSL 413.54□□□□□ -0.244e-7■■■■□ 21
CSTF2TQ9H0L4 KLF11-206ENST00000540845 3885 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.584e-7■■■■□ 21
CSTF2TQ9H0L4 KLF11-202ENST00000401510 614 ntTSL 37.69□□□□□ -1.184e-7■■■■□ 21
CSTF2TQ9H0L4 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.05■■□□□ 1.124e-7■■■■□ 21
CSTF2TQ9H0L4 CCDC57-207ENST00000419322 2829 ntAPPRIS ALT2 TSL 513.88□□□□□ -0.199e-8■■■■□ 21
CSTF2TQ9H0L4 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.339e-8■■■■□ 21
CSTF2TQ9H0L4 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.339e-8■■■■□ 21
CSTF2TQ9H0L4 DNMT3A-204ENST00000380756 4477 ntTSL 1 (best)11.96□□□□□ -0.494e-7■■■■□ 21
CSTF2TQ9H0L4 DNMT3A-201ENST00000264709 9501 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.624e-7■■■■□ 21
CSTF2TQ9H0L4 CCDC57-205ENST00000392346 2964 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.719e-8■■■■□ 21
CSTF2TQ9H0L4 RPH3AL-218ENST00000575736 566 ntTSL 515.33■□□□□ 0.046e-7■■■■□ 21
Retrieved 100 of 19,151 protein–RNA pairs in 183.1 ms