RNA–Protein interactions for RNA: ENST00000565298.5

IFT140-206, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 4,727 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-206ENST00000565298 DCAF8L2P0C7V8 631 aa34.21■■■■□ 3.07
IFT140-206ENST00000565298 NISCHQ9Y2I1 1504 aa33.57■■■□□ 2.96
IFT140-206ENST00000565298 SUPT5HO00267 1087 aaKnown RBP31.95■■■□□ 2.71
IFT140-206ENST00000565298 SHROOM4Q9ULL8 1493 aa31.6■■■□□ 2.65
IFT140-206ENST00000565298 EHMT2Q96KQ7 1210 aa30.51■■■□□ 2.47
IFT140-206ENST00000565298 FAM9AQ8IZU1 332 aaPredicted RBP30.38■■■□□ 2.45
IFT140-206ENST00000565298 APLP2Q06481 763 aa30.37■■■□□ 2.45
IFT140-206ENST00000565298 TRIM41Q8WV44 630 aa29.8■■■□□ 2.36
IFT140-206ENST00000565298 RANGAP1P46060 587 aaPredicted RBP29.52■■■□□ 2.32
IFT140-206ENST00000565298 UBTFP17480 764 aaKnown RBP29.42■■■□□ 2.3
IFT140-206ENST00000565298 ATP1B4Q9UN42 357 aaPredicted RBP29.4■■■□□ 2.3
IFT140-206ENST00000565298 TTBK1Q5TCY1 1321 aaPredicted RBP29.39■■■□□ 2.29
IFT140-206ENST00000565298 ABCC9O60706 1549 aa29.2■■■□□ 2.26
IFT140-206ENST00000565298 PCGF6Q9BYE7 350 aa29.02■■■□□ 2.24
IFT140-206ENST00000565298 PELP1Q8IZL8 1130 aaKnown RBP28.96■■■□□ 2.23
IFT140-206ENST00000565298 PABPN1Q86U42 306 aaKnown RBP eCLIP28.84■■■□□ 2.21
IFT140-206ENST00000565298 CCER1Q8TC90 406 aaPredicted RBP28.77■■■□□ 2.2
IFT140-206ENST00000565298 ZEB1P37275 1124 aaPredicted RBP28.73■■■□□ 2.19
IFT140-206ENST00000565298 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.64■■■□□ 2.18
IFT140-206ENST00000565298 HNRNPUL2Q1KMD3 747 aaKnown RBP28.64■■■□□ 2.18
IFT140-206ENST00000565298 MYT1LQ9UL68 1186 aa28.48■■■□□ 2.15
IFT140-206ENST00000565298 CHIC1Q5VXU3 224 aa28.4■■■□□ 2.14
IFT140-206ENST00000565298 PPARGC1BQ86YN6 1023 aaKnown RBP28.32■■■□□ 2.12
IFT140-206ENST00000565298 ITGAEP38570 1179 aa28.19■■■□□ 2.1
IFT140-206ENST00000565298 CENPBP07199 599 aaPredicted RBP28.16■■■□□ 2.1
IFT140-206ENST00000565298 TRIM26Q12899 539 aaPredicted RBP28.16■■■□□ 2.1
IFT140-206ENST00000565298 LOC105371045A0A1W2PR82 267 aa28.11■■■□□ 2.09
IFT140-206ENST00000565298 FBLN2P98095 1184 aa27.9■■■□□ 2.06
IFT140-206ENST00000565298 SCRIBQ14160 1630 aa27.8■■■□□ 2.04
IFT140-206ENST00000565298 NEFLP07196 543 aa27.76■■■□□ 2.04
IFT140-206ENST00000565298 ZCCHC6Q5VYS8 1495 aaKnown RBP27.72■■■□□ 2.03
IFT140-206ENST00000565298 CCDC180Q9P1Z9 1646 aa27.72■■■□□ 2.03
IFT140-206ENST00000565298 POLR3GLQ9BT43 218 aa27.7■■■□□ 2.02
IFT140-206ENST00000565298 FAM50AQ14320 339 aaKnown RBP27.68■■■□□ 2.02
IFT140-206ENST00000565298 CSRNP3Q8WYN3 585 aa27.53■■■□□ 2
IFT140-206ENST00000565298 YTHDC1Q96MU7 727 aaKnown RBP27.51■■□□□ 1.99
IFT140-206ENST00000565298 TRIM52Q96A61 297 aa27.5■■□□□ 1.99
IFT140-206ENST00000565298 ERICH6Q7L0X2 663 aa27.47■■□□□ 1.99
IFT140-206ENST00000565298 RB1CC1Q8TDY2 1594 aa27.41■■□□□ 1.98
IFT140-206ENST00000565298 SLC4A1APQ9BWU0 796 aaKnown RBP27.37■■□□□ 1.97
IFT140-206ENST00000565298 CDK11AQ9UQ88 783 aaPredicted RBP27.35■■□□□ 1.97
IFT140-206ENST00000565298 HRCP23327 699 aa27.34■■□□□ 1.97
IFT140-206ENST00000565298 P3H3Q8IVL6 736 aa27.32■■□□□ 1.96
IFT140-206ENST00000565298 CNGB1Q14028 1251 aaPredicted RBP27.24■■□□□ 1.95
IFT140-206ENST00000565298 ARID3CA6NKF2 412 aa27.19■■□□□ 1.94
IFT140-206ENST00000565298 NPM1P06748 294 aaKnown RBP eCLIP27.18■■□□□ 1.94
IFT140-206ENST00000565298 NACADO15069 1562 aa27.15■■□□□ 1.94
IFT140-206ENST00000565298 NEUROD1Q13562 356 aa27.11■■□□□ 1.93
IFT140-206ENST00000565298 ZNF777Q9ULD5 760 aaPredicted RBP27.06■■□□□ 1.92
IFT140-206ENST00000565298 ZNF326Q5BKZ1 582 aaKnown RBP27.02■■□□□ 1.92
IFT140-206ENST00000565298 ESF1Q9H501 851 aaKnown RBP26.99■■□□□ 1.91
IFT140-206ENST00000565298 CHMP7Q8WUX9 453 aaPredicted RBP26.94■■□□□ 1.9
IFT140-206ENST00000565298 BCANQ96GW7 911 aa26.91■■□□□ 1.9
IFT140-206ENST00000565298 DAXXQ9UER7 740 aaPredicted RBP26.81■■□□□ 1.88
IFT140-206ENST00000565298 DIEXFQ68CQ4 756 aaKnown RBP26.8■■□□□ 1.88
IFT140-206ENST00000565298 BAZ1BQ9UIG0 1483 aaKnown RBP26.77■■□□□ 1.88
IFT140-206ENST00000565298 RSF1Q96T23 1441 aaPredicted RBP26.73■■□□□ 1.87
IFT140-206ENST00000565298 ANP32CO43423 234 aa26.67■■□□□ 1.86
IFT140-206ENST00000565298 STAG3Q9UJ98 1225 aa26.67■■□□□ 1.86
IFT140-206ENST00000565298 TSPY4P0CV99 314 aa26.63■■□□□ 1.85
IFT140-206ENST00000565298 TSPY10P0CW01 314 aa26.63■■□□□ 1.85
IFT140-206ENST00000565298 DCAF1Q9Y4B6 1507 aa26.61■■□□□ 1.85
IFT140-206ENST00000565298 NEFMP07197 916 aa26.59■■□□□ 1.85
IFT140-206ENST00000565298 CHGAP10645 457 aaKnown RBP26.58■■□□□ 1.85
IFT140-206ENST00000565298 MTUS2Q5JR59 1369 aa26.58■■□□□ 1.85
IFT140-206ENST00000565298 EEA1Q15075 1411 aa26.56■■□□□ 1.84
IFT140-206ENST00000565298 CLSPNQ9HAW4 1339 aa26.53■■□□□ 1.84
IFT140-206ENST00000565298 BAZ1AQ9NRL2 1556 aaPredicted RBP26.52■■□□□ 1.84
IFT140-206ENST00000565298 WRNQ14191 1432 aaPredicted RBP eCLIP26.51■■□□□ 1.84
IFT140-206ENST00000565298 ERCC6Q03468 1493 aa26.5■■□□□ 1.83
IFT140-206ENST00000565298 TONSLQ96HA7 1378 aa26.46■■□□□ 1.83
IFT140-206ENST00000565298 CLIP1P30622 1438 aa26.45■■□□□ 1.82
IFT140-206ENST00000565298 PLEKHD1A6NEE1 506 aa26.45■■□□□ 1.82
IFT140-206ENST00000565298 ZNF316A6NFI3 1004 aaPredicted RBP26.43■■□□□ 1.82
IFT140-206ENST00000565298 KIF27Q86VH2 1401 aa26.43■■□□□ 1.82
IFT140-206ENST00000565298 CHIC2Q9UKJ5 165 aa26.43■■□□□ 1.82
IFT140-206ENST00000565298 PLPPR3Q6T4P5 718 aa26.42■■□□□ 1.82
IFT140-206ENST00000565298 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.41■■□□□ 1.82
IFT140-206ENST00000565298 ZBTB47Q9UFB7 747 aaPredicted RBP26.37■■□□□ 1.81
IFT140-206ENST00000565298 SLC24A1O60721 1099 aa26.36■■□□□ 1.81
IFT140-206ENST00000565298 KCNH8Q96L42 1107 aa26.34■■□□□ 1.81
IFT140-206ENST00000565298 GOLGA3Q08378 1498 aa26.31■■□□□ 1.8
IFT140-206ENST00000565298 CECR2Q9BXF3 1484 aa26.25■■□□□ 1.79
IFT140-206ENST00000565298 CANXP27824 592 aaKnown RBP26.22■■□□□ 1.79
IFT140-206ENST00000565298 ACIN1Q9UKV3 1341 aaKnown RBP26.21■■□□□ 1.79
IFT140-206ENST00000565298 CEP164Q9UPV0 1460 aa26.14■■□□□ 1.77
IFT140-206ENST00000565298 CFDP1Q9UEE9 299 aaPredicted RBP26.13■■□□□ 1.77
IFT140-206ENST00000565298 CEP162Q5TB80 1403 aa26.09■■□□□ 1.77
IFT140-206ENST00000565298 PDS5BQ9NTI5 1447 aa26.08■■□□□ 1.77
IFT140-206ENST00000565298 SMARCA2P51531 1590 aa26.06■■□□□ 1.76
IFT140-206ENST00000565298 RRP7BPQ9NSQ0 103 aa26.05■■□□□ 1.76
IFT140-206ENST00000565298 KDM2AQ9Y2K7 1162 aa26.04■■□□□ 1.76
IFT140-206ENST00000565298 TNIKQ9UKE5 1360 aa26.04■■□□□ 1.76
IFT140-206ENST00000565298 PPP1R15AO75807 674 aaPredicted RBP26.02■■□□□ 1.76
IFT140-206ENST00000565298 ARID4BQ4LE39 1312 aaPredicted RBP26■■□□□ 1.75
IFT140-206ENST00000565298 CARMIL1Q5VZK9 1371 aa25.99■■□□□ 1.75
IFT140-206ENST00000565298 MYO15BQ96JP2 1530 aa25.99■■□□□ 1.75
IFT140-206ENST00000565298 CUX2O14529 1486 aa25.98■■□□□ 1.75
IFT140-206ENST00000565298 FHAD1B1AJZ9 1412 aa25.89■■□□□ 1.74
IFT140-206ENST00000565298 MROH2BQ7Z745 1585 aa25.89■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms