Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.1■□□□□ 0.33
CCL13Q99616 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL13Q99616 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL13Q99616 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.09■□□□□ 0.33
CCL13Q99616 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCL13Q99616 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCL13Q99616 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCL13Q99616 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.09■□□□□ 0.33
CCL13Q99616 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.09■□□□□ 0.33
CCL13Q99616 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.09■□□□□ 0.33
CCL13Q99616 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.09■□□□□ 0.33
CCL13Q99616 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.09■□□□□ 0.33
CCL13Q99616 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCL13Q99616 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL13Q99616 CYP21A1P-202ENST00000354927 1481 ntBASIC17.09■□□□□ 0.33
CCL13Q99616 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CCL13Q99616 MKRN4P-201ENST00000444706 1521 ntBASIC17.09■□□□□ 0.33
CCL13Q99616 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.09■□□□□ 0.33
CCL13Q99616 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL13Q99616 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.09■□□□□ 0.33
CCL13Q99616 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL13Q99616 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
CCL13Q99616 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.09■□□□□ 0.33
CCL13Q99616 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL13Q99616 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL13Q99616 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.09■□□□□ 0.33
CCL13Q99616 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCL13Q99616 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCL13Q99616 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCL13Q99616 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCL13Q99616 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCL13Q99616 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CCL13Q99616 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.08■□□□□ 0.32
CCL13Q99616 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL13Q99616 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL13Q99616 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCL13Q99616 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL13Q99616 MCRIP2P1-201ENST00000394346 511 ntBASIC17.08■□□□□ 0.32
CCL13Q99616 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.08■□□□□ 0.32
CCL13Q99616 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.08■□□□□ 0.32
CCL13Q99616 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CCL13Q99616 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CCL13Q99616 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL13Q99616 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL13Q99616 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL13Q99616 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL13Q99616 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCL13Q99616 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL13Q99616 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL13Q99616 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCL13Q99616 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCL13Q99616 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCL13Q99616 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCL13Q99616 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CCL13Q99616 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCL13Q99616 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCL13Q99616 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCL13Q99616 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCL13Q99616 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCL13Q99616 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.07■□□□□ 0.32
CCL13Q99616 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CCL13Q99616 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCL13Q99616 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCL13Q99616 SLC29A4P1-201ENST00000398760 971 ntBASIC17.07■□□□□ 0.32
CCL13Q99616 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCL13Q99616 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.07■□□□□ 0.32
CCL13Q99616 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.07■□□□□ 0.32
CCL13Q99616 AC100791.3-201ENST00000617619 330 ntBASIC17.07■□□□□ 0.32
CCL13Q99616 AL109923.1-201ENST00000618799 583 ntBASIC17.07■□□□□ 0.32
CCL13Q99616 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCL13Q99616 AC007225.1-201ENST00000566331 1836 ntBASIC17.07■□□□□ 0.32
CCL13Q99616 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.07■□□□□ 0.32
CCL13Q99616 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCL13Q99616 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CCL13Q99616 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CCL13Q99616 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CCL13Q99616 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL13Q99616 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCL13Q99616 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCL13Q99616 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL13Q99616 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.06■□□□□ 0.32
CCL13Q99616 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.06■□□□□ 0.32
CCL13Q99616 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.06■□□□□ 0.32
CCL13Q99616 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.06■□□□□ 0.32
CCL13Q99616 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
CCL13Q99616 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.06■□□□□ 0.32
CCL13Q99616 CYP2T3P-201ENST00000601990 817 ntBASIC17.06■□□□□ 0.32
CCL13Q99616 MIR2861-201ENST00000636310 90 ntBASIC17.06■□□□□ 0.32
CCL13Q99616 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CCL13Q99616 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCL13Q99616 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL13Q99616 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.05■□□□□ 0.32
CCL13Q99616 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCL13Q99616 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.05■□□□□ 0.32
CCL13Q99616 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.05■□□□□ 0.32
CCL13Q99616 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCL13Q99616 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCL13Q99616 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCL13Q99616 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCL13Q99616 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms