Protein–RNA interactions for Protein: Q96P71

NECAB3, N-terminal EF-hand calcium-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3Q96P71 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.14■□□□□ 0.97
NECAB3Q96P71 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
NECAB3Q96P71 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.14■□□□□ 0.97
NECAB3Q96P71 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.13■□□□□ 0.97
NECAB3Q96P71 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NECAB3Q96P71 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NECAB3Q96P71 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NECAB3Q96P71 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NECAB3Q96P71 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NECAB3Q96P71 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NECAB3Q96P71 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NECAB3Q96P71 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NECAB3Q96P71 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NECAB3Q96P71 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.13■□□□□ 0.97
NECAB3Q96P71 AP002982.1-201ENST00000492365 877 ntBASIC21.13■□□□□ 0.97
NECAB3Q96P71 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.13■□□□□ 0.97
NECAB3Q96P71 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC21.13■□□□□ 0.97
NECAB3Q96P71 LINC01238-205ENST00000567549 1107 ntBASIC21.13■□□□□ 0.97
NECAB3Q96P71 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.13■□□□□ 0.97
NECAB3Q96P71 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NECAB3Q96P71 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NECAB3Q96P71 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.12■□□□□ 0.97
NECAB3Q96P71 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
NECAB3Q96P71 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.12■□□□□ 0.97
NECAB3Q96P71 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NECAB3Q96P71 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NECAB3Q96P71 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
NECAB3Q96P71 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
NECAB3Q96P71 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
NECAB3Q96P71 AP000347.1-202ENST00000435868 847 ntBASIC21.12■□□□□ 0.97
NECAB3Q96P71 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.12■□□□□ 0.97
NECAB3Q96P71 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NECAB3Q96P71 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.12■□□□□ 0.97
NECAB3Q96P71 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC21.12■□□□□ 0.97
NECAB3Q96P71 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NECAB3Q96P71 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.12■□□□□ 0.97
NECAB3Q96P71 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NECAB3Q96P71 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC21.11■□□□□ 0.97
NECAB3Q96P71 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NECAB3Q96P71 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.11■□□□□ 0.97
NECAB3Q96P71 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NECAB3Q96P71 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.11■□□□□ 0.97
NECAB3Q96P71 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
NECAB3Q96P71 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.11■□□□□ 0.97
NECAB3Q96P71 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NECAB3Q96P71 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NECAB3Q96P71 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.11■□□□□ 0.97
NECAB3Q96P71 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.11■□□□□ 0.97
NECAB3Q96P71 GPALPP1-207ENST00000611650 899 ntBASIC21.11■□□□□ 0.97
NECAB3Q96P71 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.11■□□□□ 0.97
NECAB3Q96P71 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NECAB3Q96P71 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.1■□□□□ 0.97
NECAB3Q96P71 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
NECAB3Q96P71 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NECAB3Q96P71 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NECAB3Q96P71 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.1■□□□□ 0.97
NECAB3Q96P71 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NECAB3Q96P71 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.1■□□□□ 0.97
NECAB3Q96P71 AC116562.2-201ENST00000507042 360 ntBASIC21.1■□□□□ 0.97
NECAB3Q96P71 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.1■□□□□ 0.97
NECAB3Q96P71 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.1■□□□□ 0.97
NECAB3Q96P71 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NECAB3Q96P71 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NECAB3Q96P71 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NECAB3Q96P71 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NECAB3Q96P71 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.1■□□□□ 0.97
NECAB3Q96P71 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NECAB3Q96P71 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NECAB3Q96P71 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NECAB3Q96P71 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
NECAB3Q96P71 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.09■□□□□ 0.97
NECAB3Q96P71 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NECAB3Q96P71 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
NECAB3Q96P71 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
NECAB3Q96P71 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NECAB3Q96P71 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NECAB3Q96P71 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NECAB3Q96P71 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NECAB3Q96P71 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.09■□□□□ 0.97
NECAB3Q96P71 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NECAB3Q96P71 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NECAB3Q96P71 AC117947.1-201ENST00000427448 529 ntBASIC21.09■□□□□ 0.97
NECAB3Q96P71 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.09■□□□□ 0.97
NECAB3Q96P71 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC21.09■□□□□ 0.97
NECAB3Q96P71 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.09■□□□□ 0.97
NECAB3Q96P71 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.09■□□□□ 0.97
NECAB3Q96P71 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.09■□□□□ 0.97
NECAB3Q96P71 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NECAB3Q96P71 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.09■□□□□ 0.97
NECAB3Q96P71 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NECAB3Q96P71 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NECAB3Q96P71 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NECAB3Q96P71 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
NECAB3Q96P71 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NECAB3Q96P71 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.08■□□□□ 0.97
NECAB3Q96P71 HCG4P8-203ENST00000443049 980 ntBASIC21.08■□□□□ 0.97
NECAB3Q96P71 BX664615.1-201ENST00000443558 458 ntBASIC21.08■□□□□ 0.97
NECAB3Q96P71 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
NECAB3Q96P71 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NECAB3Q96P71 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms