Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CKAP2Q8WWK9 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.27■□□□□ 0.84
CKAP2Q8WWK9 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CKAP2Q8WWK9 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.27■□□□□ 0.83
CKAP2Q8WWK9 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
CKAP2Q8WWK9 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CKAP2Q8WWK9 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.27■□□□□ 0.83
CKAP2Q8WWK9 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CKAP2Q8WWK9 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CKAP2Q8WWK9 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CKAP2Q8WWK9 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CKAP2Q8WWK9 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CKAP2Q8WWK9 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
CKAP2Q8WWK9 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.26■□□□□ 0.83
CKAP2Q8WWK9 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CKAP2Q8WWK9 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CKAP2Q8WWK9 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.26■□□□□ 0.83
CKAP2Q8WWK9 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.26■□□□□ 0.83
CKAP2Q8WWK9 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.26■□□□□ 0.83
CKAP2Q8WWK9 TMEM179-206ENST00000616017 1645 ntBASIC20.26■□□□□ 0.83
CKAP2Q8WWK9 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CKAP2Q8WWK9 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CKAP2Q8WWK9 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.26■□□□□ 0.83
CKAP2Q8WWK9 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.26■□□□□ 0.83
CKAP2Q8WWK9 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CKAP2Q8WWK9 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CKAP2Q8WWK9 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CKAP2Q8WWK9 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CKAP2Q8WWK9 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CKAP2Q8WWK9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CKAP2Q8WWK9 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CKAP2Q8WWK9 AC093484.2-201ENST00000580996 2166 ntBASIC20.25■□□□□ 0.83
CKAP2Q8WWK9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CKAP2Q8WWK9 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CKAP2Q8WWK9 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.25■□□□□ 0.83
CKAP2Q8WWK9 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CKAP2Q8WWK9 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CKAP2Q8WWK9 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CKAP2Q8WWK9 SERBP1P1-201ENST00000396021 1160 ntBASIC20.25■□□□□ 0.83
CKAP2Q8WWK9 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.25■□□□□ 0.83
CKAP2Q8WWK9 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.25■□□□□ 0.83
CKAP2Q8WWK9 AC136469.2-201ENST00000623944 1028 ntBASIC20.25■□□□□ 0.83
CKAP2Q8WWK9 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CKAP2Q8WWK9 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CKAP2Q8WWK9 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CKAP2Q8WWK9 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
CKAP2Q8WWK9 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CKAP2Q8WWK9 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CKAP2Q8WWK9 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.24■□□□□ 0.83
CKAP2Q8WWK9 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CKAP2Q8WWK9 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CKAP2Q8WWK9 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CKAP2Q8WWK9 AL356740.2-201ENST00000601559 647 ntBASIC20.24■□□□□ 0.83
CKAP2Q8WWK9 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CKAP2Q8WWK9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.24■□□□□ 0.83
CKAP2Q8WWK9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CKAP2Q8WWK9 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CKAP2Q8WWK9 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CKAP2Q8WWK9 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.24■□□□□ 0.83
CKAP2Q8WWK9 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CKAP2Q8WWK9 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CKAP2Q8WWK9 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CKAP2Q8WWK9 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CKAP2Q8WWK9 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CKAP2Q8WWK9 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CKAP2Q8WWK9 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CKAP2Q8WWK9 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
CKAP2Q8WWK9 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CKAP2Q8WWK9 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CKAP2Q8WWK9 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CKAP2Q8WWK9 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.23■□□□□ 0.83
CKAP2Q8WWK9 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.23■□□□□ 0.83
CKAP2Q8WWK9 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CKAP2Q8WWK9 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.23■□□□□ 0.83
CKAP2Q8WWK9 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
CKAP2Q8WWK9 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.23■□□□□ 0.83
CKAP2Q8WWK9 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
CKAP2Q8WWK9 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CKAP2Q8WWK9 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CKAP2Q8WWK9 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.23■□□□□ 0.83
CKAP2Q8WWK9 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CKAP2Q8WWK9 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CKAP2Q8WWK9 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.22■□□□□ 0.83
CKAP2Q8WWK9 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CKAP2Q8WWK9 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CKAP2Q8WWK9 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CKAP2Q8WWK9 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.22■□□□□ 0.83
CKAP2Q8WWK9 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.22■□□□□ 0.83
CKAP2Q8WWK9 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CKAP2Q8WWK9 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CKAP2Q8WWK9 AP004607.4-201ENST00000530158 1459 ntBASIC20.22■□□□□ 0.83
CKAP2Q8WWK9 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CKAP2Q8WWK9 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.22■□□□□ 0.83
CKAP2Q8WWK9 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CKAP2Q8WWK9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CKAP2Q8WWK9 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.22■□□□□ 0.83
CKAP2Q8WWK9 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CKAP2Q8WWK9 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CKAP2Q8WWK9 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CKAP2Q8WWK9 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms