Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ALMS1Q8TCU4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC13.91□□□□□ -0.18
ALMS1Q8TCU4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ALMS1Q8TCU4 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.91□□□□□ -0.18
ALMS1Q8TCU4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC13.91□□□□□ -0.18
ALMS1Q8TCU4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ALMS1Q8TCU4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ALMS1Q8TCU4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
ALMS1Q8TCU4 AC116050.2-201ENST00000612102 1779 ntBASIC13.91□□□□□ -0.18
ALMS1Q8TCU4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ALMS1Q8TCU4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ALMS1Q8TCU4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ALMS1Q8TCU4 AC093323.1-202ENST00000635031 2045 ntBASIC13.91□□□□□ -0.18
ALMS1Q8TCU4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
ALMS1Q8TCU4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
ALMS1Q8TCU4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
ALMS1Q8TCU4 AC104076.2-201ENST00000448912 469 ntBASIC13.9□□□□□ -0.18
ALMS1Q8TCU4 WWOX-216ENST00000569818 525 ntBASIC13.9□□□□□ -0.18
ALMS1Q8TCU4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ALMS1Q8TCU4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC13.9□□□□□ -0.18
ALMS1Q8TCU4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ALMS1Q8TCU4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ALMS1Q8TCU4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC13.9□□□□□ -0.18
ALMS1Q8TCU4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ALMS1Q8TCU4 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.9□□□□□ -0.18
ALMS1Q8TCU4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC13.9□□□□□ -0.18
ALMS1Q8TCU4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC13.9□□□□□ -0.18
ALMS1Q8TCU4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ALMS1Q8TCU4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC13.9□□□□□ -0.18
ALMS1Q8TCU4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC13.9□□□□□ -0.18
ALMS1Q8TCU4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ALMS1Q8TCU4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC13.9□□□□□ -0.18
ALMS1Q8TCU4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.9□□□□□ -0.18
ALMS1Q8TCU4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC13.9□□□□□ -0.18
ALMS1Q8TCU4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ALMS1Q8TCU4 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
ALMS1Q8TCU4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ALMS1Q8TCU4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ALMS1Q8TCU4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ALMS1Q8TCU4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC13.9□□□□□ -0.19
ALMS1Q8TCU4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC13.9□□□□□ -0.19
ALMS1Q8TCU4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC13.9□□□□□ -0.19
ALMS1Q8TCU4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.9□□□□□ -0.19
ALMS1Q8TCU4 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC13.9□□□□□ -0.19
ALMS1Q8TCU4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
ALMS1Q8TCU4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ALMS1Q8TCU4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ALMS1Q8TCU4 LGALS8-AS1-201ENST00000487567 1457 ntBASIC13.89□□□□□ -0.19
ALMS1Q8TCU4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC13.89□□□□□ -0.19
ALMS1Q8TCU4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ALMS1Q8TCU4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ALMS1Q8TCU4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ALMS1Q8TCU4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ALMS1Q8TCU4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
ALMS1Q8TCU4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC13.89□□□□□ -0.19
ALMS1Q8TCU4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC13.89□□□□□ -0.19
ALMS1Q8TCU4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ALMS1Q8TCU4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC13.89□□□□□ -0.19
ALMS1Q8TCU4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC13.89□□□□□ -0.19
ALMS1Q8TCU4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ALMS1Q8TCU4 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ALMS1Q8TCU4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ALMS1Q8TCU4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ALMS1Q8TCU4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC13.89□□□□□ -0.19
ALMS1Q8TCU4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ALMS1Q8TCU4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ALMS1Q8TCU4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
ALMS1Q8TCU4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC13.89□□□□□ -0.19
ALMS1Q8TCU4 LTBR-211ENST00000543190 785 ntTSL 3 BASIC13.89□□□□□ -0.19
ALMS1Q8TCU4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC13.89□□□□□ -0.19
ALMS1Q8TCU4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC13.89□□□□□ -0.19
ALMS1Q8TCU4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ALMS1Q8TCU4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
ALMS1Q8TCU4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
ALMS1Q8TCU4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ALMS1Q8TCU4 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ALMS1Q8TCU4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ALMS1Q8TCU4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC13.88□□□□□ -0.19
ALMS1Q8TCU4 F2R-202ENST00000505600 442 ntTSL 2 BASIC13.88□□□□□ -0.19
ALMS1Q8TCU4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.88□□□□□ -0.19
ALMS1Q8TCU4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ALMS1Q8TCU4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ALMS1Q8TCU4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
ALMS1Q8TCU4 KRT18P48-201ENST00000434763 852 ntBASIC13.88□□□□□ -0.19
ALMS1Q8TCU4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ALMS1Q8TCU4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ALMS1Q8TCU4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC13.88□□□□□ -0.19
ALMS1Q8TCU4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC13.88□□□□□ -0.19
ALMS1Q8TCU4 AL356652.1-201ENST00000615962 565 ntBASIC13.88□□□□□ -0.19
ALMS1Q8TCU4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC13.88□□□□□ -0.19
ALMS1Q8TCU4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC13.88□□□□□ -0.19
ALMS1Q8TCU4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ALMS1Q8TCU4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC13.88□□□□□ -0.19
ALMS1Q8TCU4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ALMS1Q8TCU4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ALMS1Q8TCU4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC13.88□□□□□ -0.19
ALMS1Q8TCU4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ALMS1Q8TCU4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ALMS1Q8TCU4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ALMS1Q8TCU4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms