Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
LINC01006Q8NI28 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LINC01006Q8NI28 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01006Q8NI28 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01006Q8NI28 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC15.97■□□□□ 0.15
LINC01006Q8NI28 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01006Q8NI28 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
LINC01006Q8NI28 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC15.97■□□□□ 0.15
LINC01006Q8NI28 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01006Q8NI28 AC233723.2-201ENST00000623798 2106 ntBASIC15.97■□□□□ 0.15
LINC01006Q8NI28 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01006Q8NI28 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01006Q8NI28 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
LINC01006Q8NI28 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01006Q8NI28 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01006Q8NI28 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
LINC01006Q8NI28 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01006Q8NI28 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01006Q8NI28 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
LINC01006Q8NI28 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LINC01006Q8NI28 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.96■□□□□ 0.15
LINC01006Q8NI28 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC15.96■□□□□ 0.15
LINC01006Q8NI28 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01006Q8NI28 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01006Q8NI28 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC15.96■□□□□ 0.15
LINC01006Q8NI28 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.96■□□□□ 0.15
LINC01006Q8NI28 AL049637.2-201ENST00000641778 930 ntBASIC15.96■□□□□ 0.15
LINC01006Q8NI28 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01006Q8NI28 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LINC01006Q8NI28 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC15.96■□□□□ 0.15
LINC01006Q8NI28 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC15.96■□□□□ 0.15
LINC01006Q8NI28 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LINC01006Q8NI28 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.14
LINC01006Q8NI28 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
LINC01006Q8NI28 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC15.96■□□□□ 0.14
LINC01006Q8NI28 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC15.96■□□□□ 0.14
LINC01006Q8NI28 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LINC01006Q8NI28 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
LINC01006Q8NI28 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC01006Q8NI28 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC01006Q8NI28 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC15.95■□□□□ 0.14
LINC01006Q8NI28 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC01006Q8NI28 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LINC01006Q8NI28 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC15.95■□□□□ 0.14
LINC01006Q8NI28 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LINC01006Q8NI28 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.95■□□□□ 0.14
LINC01006Q8NI28 BX088651.1-201ENST00000540551 451 ntBASIC15.95■□□□□ 0.14
LINC01006Q8NI28 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC15.95■□□□□ 0.14
LINC01006Q8NI28 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
LINC01006Q8NI28 LINC01023-201ENST00000606054 436 ntBASIC15.95■□□□□ 0.14
LINC01006Q8NI28 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LINC01006Q8NI28 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC01006Q8NI28 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01006Q8NI28 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01006Q8NI28 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01006Q8NI28 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC15.94■□□□□ 0.14
LINC01006Q8NI28 PALM-207ENST00000590161 2137 ntTSL 4 BASIC15.94■□□□□ 0.14
LINC01006Q8NI28 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01006Q8NI28 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01006Q8NI28 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.94■□□□□ 0.14
LINC01006Q8NI28 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.94■□□□□ 0.14
LINC01006Q8NI28 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01006Q8NI28 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01006Q8NI28 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01006Q8NI28 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01006Q8NI28 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01006Q8NI28 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
LINC01006Q8NI28 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC15.94■□□□□ 0.14
LINC01006Q8NI28 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01006Q8NI28 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01006Q8NI28 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01006Q8NI28 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
LINC01006Q8NI28 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC15.94■□□□□ 0.14
LINC01006Q8NI28 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01006Q8NI28 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC15.94■□□□□ 0.14
LINC01006Q8NI28 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC15.94■□□□□ 0.14
LINC01006Q8NI28 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
LINC01006Q8NI28 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LINC01006Q8NI28 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC15.93■□□□□ 0.14
LINC01006Q8NI28 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC01006Q8NI28 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC01006Q8NI28 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC01006Q8NI28 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC01006Q8NI28 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC01006Q8NI28 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LINC01006Q8NI28 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.93■□□□□ 0.14
LINC01006Q8NI28 DYM-203ENST00000442713 2147 ntTSL 2 BASIC15.93■□□□□ 0.14
LINC01006Q8NI28 PRKY-204ENST00000533551 1019 ntBASIC15.93■□□□□ 0.14
LINC01006Q8NI28 CABP2-204ENST00000636477 941 ntTSL 5 BASIC15.93■□□□□ 0.14
LINC01006Q8NI28 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC01006Q8NI28 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LINC01006Q8NI28 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
LINC01006Q8NI28 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC01006Q8NI28 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC01006Q8NI28 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.93■□□□□ 0.14
LINC01006Q8NI28 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC01006Q8NI28 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC01006Q8NI28 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC01006Q8NI28 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC01006Q8NI28 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms