Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RFWD2Q8NHY2 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
RFWD2Q8NHY2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RFWD2Q8NHY2 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
RFWD2Q8NHY2 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RFWD2Q8NHY2 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RFWD2Q8NHY2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.14■□□□□ 0.81
RFWD2Q8NHY2 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RFWD2Q8NHY2 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RFWD2Q8NHY2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RFWD2Q8NHY2 SERBP1P1-201ENST00000396021 1160 ntBASIC20.14■□□□□ 0.81
RFWD2Q8NHY2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RFWD2Q8NHY2 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
RFWD2Q8NHY2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RFWD2Q8NHY2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RFWD2Q8NHY2 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.14■□□□□ 0.81
RFWD2Q8NHY2 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
RFWD2Q8NHY2 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.14■□□□□ 0.81
RFWD2Q8NHY2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
RFWD2Q8NHY2 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RFWD2Q8NHY2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RFWD2Q8NHY2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
RFWD2Q8NHY2 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.14■□□□□ 0.81
RFWD2Q8NHY2 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.14■□□□□ 0.81
RFWD2Q8NHY2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFWD2Q8NHY2 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RFWD2Q8NHY2 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFWD2Q8NHY2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFWD2Q8NHY2 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RFWD2Q8NHY2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFWD2Q8NHY2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFWD2Q8NHY2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFWD2Q8NHY2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.13■□□□□ 0.81
RFWD2Q8NHY2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.13■□□□□ 0.81
RFWD2Q8NHY2 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.13■□□□□ 0.81
RFWD2Q8NHY2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
RFWD2Q8NHY2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
RFWD2Q8NHY2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFWD2Q8NHY2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.13■□□□□ 0.81
RFWD2Q8NHY2 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFWD2Q8NHY2 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFWD2Q8NHY2 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFWD2Q8NHY2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFWD2Q8NHY2 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RFWD2Q8NHY2 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFWD2Q8NHY2 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.12■□□□□ 0.81
RFWD2Q8NHY2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFWD2Q8NHY2 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFWD2Q8NHY2 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
RFWD2Q8NHY2 DUX4L19-201ENST00000557448 1267 ntBASIC20.12■□□□□ 0.81
RFWD2Q8NHY2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.12■□□□□ 0.81
RFWD2Q8NHY2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.12■□□□□ 0.81
RFWD2Q8NHY2 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFWD2Q8NHY2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.12■□□□□ 0.81
RFWD2Q8NHY2 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFWD2Q8NHY2 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFWD2Q8NHY2 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFWD2Q8NHY2 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFWD2Q8NHY2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFWD2Q8NHY2 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFWD2Q8NHY2 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFWD2Q8NHY2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RFWD2Q8NHY2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFWD2Q8NHY2 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFWD2Q8NHY2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
RFWD2Q8NHY2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFWD2Q8NHY2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.11■□□□□ 0.81
RFWD2Q8NHY2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.11■□□□□ 0.81
RFWD2Q8NHY2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
RFWD2Q8NHY2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFWD2Q8NHY2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RFWD2Q8NHY2 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFWD2Q8NHY2 AC055733.4-201ENST00000638462 1354 ntBASIC20.1■□□□□ 0.81
RFWD2Q8NHY2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RFWD2Q8NHY2 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.1■□□□□ 0.81
RFWD2Q8NHY2 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RFWD2Q8NHY2 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RFWD2Q8NHY2 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RFWD2Q8NHY2 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFWD2Q8NHY2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
RFWD2Q8NHY2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.1■□□□□ 0.81
RFWD2Q8NHY2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.1■□□□□ 0.81
RFWD2Q8NHY2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.1■□□□□ 0.81
RFWD2Q8NHY2 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.1■□□□□ 0.81
RFWD2Q8NHY2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.1■□□□□ 0.81
RFWD2Q8NHY2 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFWD2Q8NHY2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RFWD2Q8NHY2 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.1■□□□□ 0.81
RFWD2Q8NHY2 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFWD2Q8NHY2 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RFWD2Q8NHY2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFWD2Q8NHY2 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.09■□□□□ 0.81
RFWD2Q8NHY2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.09■□□□□ 0.81
RFWD2Q8NHY2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.09■□□□□ 0.81
RFWD2Q8NHY2 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.09■□□□□ 0.81
RFWD2Q8NHY2 AC004408.2-201ENST00000623613 2777 ntBASIC20.09■□□□□ 0.81
RFWD2Q8NHY2 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RFWD2Q8NHY2 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.09■□□□□ 0.81
RFWD2Q8NHY2 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RFWD2Q8NHY2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms