Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLRN3Q8NCR9 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.3■□□□□ 0.2
CLRN3Q8NCR9 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLRN3Q8NCR9 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLRN3Q8NCR9 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.3■□□□□ 0.2
CLRN3Q8NCR9 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.3■□□□□ 0.2
CLRN3Q8NCR9 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLRN3Q8NCR9 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CLRN3Q8NCR9 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLRN3Q8NCR9 AC125437.2-201ENST00000625180 2167 ntBASIC16.3■□□□□ 0.2
CLRN3Q8NCR9 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLRN3Q8NCR9 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CLRN3Q8NCR9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.29■□□□□ 0.2
CLRN3Q8NCR9 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CLRN3Q8NCR9 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.29■□□□□ 0.2
CLRN3Q8NCR9 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLRN3Q8NCR9 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLRN3Q8NCR9 TCF3P1-201ENST00000423021 1937 ntBASIC16.29■□□□□ 0.2
CLRN3Q8NCR9 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.29■□□□□ 0.2
CLRN3Q8NCR9 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CLRN3Q8NCR9 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLRN3Q8NCR9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLRN3Q8NCR9 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLRN3Q8NCR9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLRN3Q8NCR9 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CLRN3Q8NCR9 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLRN3Q8NCR9 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.29■□□□□ 0.2
CLRN3Q8NCR9 AC007225.1-201ENST00000566331 1836 ntBASIC16.29■□□□□ 0.2
CLRN3Q8NCR9 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLRN3Q8NCR9 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLRN3Q8NCR9 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.29■□□□□ 0.2
CLRN3Q8NCR9 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLRN3Q8NCR9 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLRN3Q8NCR9 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.29■□□□□ 0.2
CLRN3Q8NCR9 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
CLRN3Q8NCR9 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CLRN3Q8NCR9 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLRN3Q8NCR9 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
CLRN3Q8NCR9 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLRN3Q8NCR9 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLRN3Q8NCR9 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.29■□□□□ 0.2
CLRN3Q8NCR9 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLRN3Q8NCR9 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLRN3Q8NCR9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLRN3Q8NCR9 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLRN3Q8NCR9 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLRN3Q8NCR9 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLRN3Q8NCR9 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CLRN3Q8NCR9 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLRN3Q8NCR9 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.28■□□□□ 0.2
CLRN3Q8NCR9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.28■□□□□ 0.2
CLRN3Q8NCR9 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
CLRN3Q8NCR9 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLRN3Q8NCR9 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLRN3Q8NCR9 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLRN3Q8NCR9 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
CLRN3Q8NCR9 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.28■□□□□ 0.2
CLRN3Q8NCR9 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC16.28■□□□□ 0.2
CLRN3Q8NCR9 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CLRN3Q8NCR9 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CLRN3Q8NCR9 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLRN3Q8NCR9 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.28■□□□□ 0.2
CLRN3Q8NCR9 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLRN3Q8NCR9 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLRN3Q8NCR9 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.28■□□□□ 0.2
CLRN3Q8NCR9 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.28■□□□□ 0.2
CLRN3Q8NCR9 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLRN3Q8NCR9 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLRN3Q8NCR9 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.28■□□□□ 0.2
CLRN3Q8NCR9 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLRN3Q8NCR9 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLRN3Q8NCR9 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLRN3Q8NCR9 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.27■□□□□ 0.2
CLRN3Q8NCR9 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLRN3Q8NCR9 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CLRN3Q8NCR9 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLRN3Q8NCR9 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLRN3Q8NCR9 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLRN3Q8NCR9 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLRN3Q8NCR9 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLRN3Q8NCR9 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CLRN3Q8NCR9 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLRN3Q8NCR9 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLRN3Q8NCR9 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLRN3Q8NCR9 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLRN3Q8NCR9 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLRN3Q8NCR9 MOB2-207ENST00000614710 705 ntTSL 5 BASIC16.27■□□□□ 0.2
CLRN3Q8NCR9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLRN3Q8NCR9 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.27■□□□□ 0.2
CLRN3Q8NCR9 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.27■□□□□ 0.2
CLRN3Q8NCR9 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CLRN3Q8NCR9 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLRN3Q8NCR9 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CLRN3Q8NCR9 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC16.27■□□□□ 0.19
CLRN3Q8NCR9 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CLRN3Q8NCR9 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLRN3Q8NCR9 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLRN3Q8NCR9 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC16.26■□□□□ 0.19
CLRN3Q8NCR9 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLRN3Q8NCR9 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms