Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE9Q8IYJ1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CPNE9Q8IYJ1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE9Q8IYJ1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE9Q8IYJ1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CPNE9Q8IYJ1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.18■□□□□ 0.82
CPNE9Q8IYJ1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE9Q8IYJ1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
CPNE9Q8IYJ1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.18■□□□□ 0.82
CPNE9Q8IYJ1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.18■□□□□ 0.82
CPNE9Q8IYJ1 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
CPNE9Q8IYJ1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE9Q8IYJ1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE9Q8IYJ1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.17■□□□□ 0.82
CPNE9Q8IYJ1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.17■□□□□ 0.82
CPNE9Q8IYJ1 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.17■□□□□ 0.82
CPNE9Q8IYJ1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.17■□□□□ 0.82
CPNE9Q8IYJ1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE9Q8IYJ1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE9Q8IYJ1 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE9Q8IYJ1 MFSD11-216ENST00000590393 1141 ntBASIC20.17■□□□□ 0.82
CPNE9Q8IYJ1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.17■□□□□ 0.82
CPNE9Q8IYJ1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE9Q8IYJ1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.17■□□□□ 0.82
CPNE9Q8IYJ1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.17■□□□□ 0.82
CPNE9Q8IYJ1 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE9Q8IYJ1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE9Q8IYJ1 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE9Q8IYJ1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE9Q8IYJ1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE9Q8IYJ1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CPNE9Q8IYJ1 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE9Q8IYJ1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE9Q8IYJ1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
CPNE9Q8IYJ1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE9Q8IYJ1 AC020907.5-201ENST00000624372 1936 ntBASIC20.16■□□□□ 0.82
CPNE9Q8IYJ1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE9Q8IYJ1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.16■□□□□ 0.82
CPNE9Q8IYJ1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CPNE9Q8IYJ1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.16■□□□□ 0.82
CPNE9Q8IYJ1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CPNE9Q8IYJ1 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.16■□□□□ 0.82
CPNE9Q8IYJ1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CPNE9Q8IYJ1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.16■□□□□ 0.82
CPNE9Q8IYJ1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CPNE9Q8IYJ1 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE9Q8IYJ1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.16■□□□□ 0.82
CPNE9Q8IYJ1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CPNE9Q8IYJ1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE9Q8IYJ1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE9Q8IYJ1 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.16■□□□□ 0.82
CPNE9Q8IYJ1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE9Q8IYJ1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.15■□□□□ 0.82
CPNE9Q8IYJ1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE9Q8IYJ1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE9Q8IYJ1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE9Q8IYJ1 AC006015.1-201ENST00000429970 570 ntBASIC20.15■□□□□ 0.82
CPNE9Q8IYJ1 CDV3P1-201ENST00000471403 739 ntBASIC20.15■□□□□ 0.82
CPNE9Q8IYJ1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.15■□□□□ 0.82
CPNE9Q8IYJ1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.15■□□□□ 0.82
CPNE9Q8IYJ1 MIR2861-201ENST00000636310 90 ntBASIC20.15■□□□□ 0.82
CPNE9Q8IYJ1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CPNE9Q8IYJ1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE9Q8IYJ1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CPNE9Q8IYJ1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE9Q8IYJ1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.15■□□□□ 0.82
CPNE9Q8IYJ1 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CPNE9Q8IYJ1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE9Q8IYJ1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.15■□□□□ 0.82
CPNE9Q8IYJ1 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE9Q8IYJ1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.15■□□□□ 0.82
CPNE9Q8IYJ1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE9Q8IYJ1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CPNE9Q8IYJ1 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CPNE9Q8IYJ1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPNE9Q8IYJ1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CPNE9Q8IYJ1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPNE9Q8IYJ1 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPNE9Q8IYJ1 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPNE9Q8IYJ1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPNE9Q8IYJ1 MIR935-201ENST00000401179 91 ntBASIC20.14■□□□□ 0.81
CPNE9Q8IYJ1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CPNE9Q8IYJ1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.14■□□□□ 0.81
CPNE9Q8IYJ1 AC011767.1-201ENST00000617410 1153 ntBASIC20.14■□□□□ 0.81
CPNE9Q8IYJ1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CPNE9Q8IYJ1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPNE9Q8IYJ1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPNE9Q8IYJ1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.14■□□□□ 0.81
CPNE9Q8IYJ1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE9Q8IYJ1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE9Q8IYJ1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE9Q8IYJ1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
CPNE9Q8IYJ1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE9Q8IYJ1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE9Q8IYJ1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE9Q8IYJ1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE9Q8IYJ1 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE9Q8IYJ1 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE9Q8IYJ1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE9Q8IYJ1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms