Protein–RNA interactions for Protein: Q8IYA2

CCDC144CP, Putative coiled-coil domain-containing protein 144C, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CPQ8IYA2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC144CPQ8IYA2 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC24.07■■□□□ 1.44
CCDC144CPQ8IYA2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC144CPQ8IYA2 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC144CPQ8IYA2 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
CCDC144CPQ8IYA2 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC24.07■■□□□ 1.44
CCDC144CPQ8IYA2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC144CPQ8IYA2 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC144CPQ8IYA2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC24.07■■□□□ 1.44
CCDC144CPQ8IYA2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
CCDC144CPQ8IYA2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC24.07■■□□□ 1.44
CCDC144CPQ8IYA2 AL157384.1-201ENST00000445995 2473 ntBASIC24.07■■□□□ 1.44
CCDC144CPQ8IYA2 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC24.07■■□□□ 1.44
CCDC144CPQ8IYA2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC144CPQ8IYA2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
CCDC144CPQ8IYA2 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
CCDC144CPQ8IYA2 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC144CPQ8IYA2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC24.07■■□□□ 1.44
CCDC144CPQ8IYA2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
CCDC144CPQ8IYA2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC144CPQ8IYA2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC144CPQ8IYA2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC144CPQ8IYA2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC24.06■■□□□ 1.44
CCDC144CPQ8IYA2 AC006128.1-201ENST00000624704 1661 ntBASIC24.06■■□□□ 1.44
CCDC144CPQ8IYA2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC144CPQ8IYA2 AC007322.3-201ENST00000426526 701 ntBASIC24.06■■□□□ 1.44
CCDC144CPQ8IYA2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC144CPQ8IYA2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC24.06■■□□□ 1.44
CCDC144CPQ8IYA2 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC24.06■■□□□ 1.44
CCDC144CPQ8IYA2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC144CPQ8IYA2 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC144CPQ8IYA2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC144CPQ8IYA2 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
CCDC144CPQ8IYA2 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC144CPQ8IYA2 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC144CPQ8IYA2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC144CPQ8IYA2 MKRN4P-201ENST00000444706 1521 ntBASIC24.05■■□□□ 1.44
CCDC144CPQ8IYA2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC144CPQ8IYA2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC144CPQ8IYA2 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC144CPQ8IYA2 MIPEPP3-201ENST00000412105 444 ntBASIC24.05■■□□□ 1.44
CCDC144CPQ8IYA2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC144CPQ8IYA2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC24.05■■□□□ 1.44
CCDC144CPQ8IYA2 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC24.05■■□□□ 1.44
CCDC144CPQ8IYA2 MIR4758-201ENST00000577688 71 ntBASIC24.05■■□□□ 1.44
CCDC144CPQ8IYA2 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
CCDC144CPQ8IYA2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
CCDC144CPQ8IYA2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC24.05■■□□□ 1.44
CCDC144CPQ8IYA2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
CCDC144CPQ8IYA2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
CCDC144CPQ8IYA2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC144CPQ8IYA2 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC144CPQ8IYA2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC144CPQ8IYA2 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC144CPQ8IYA2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
CCDC144CPQ8IYA2 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC144CPQ8IYA2 AC093787.1-201ENST00000450396 207 ntBASIC24.04■■□□□ 1.44
CCDC144CPQ8IYA2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC144CPQ8IYA2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC24.04■■□□□ 1.44
CCDC144CPQ8IYA2 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC24.04■■□□□ 1.44
CCDC144CPQ8IYA2 OR10C1-204ENST00000622521 1039 ntBASIC24.04■■□□□ 1.44
CCDC144CPQ8IYA2 TBCB-214ENST00000629269 413 ntTSL 5 BASIC24.04■■□□□ 1.44
CCDC144CPQ8IYA2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC144CPQ8IYA2 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC144CPQ8IYA2 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC24.04■■□□□ 1.44
CCDC144CPQ8IYA2 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC24.04■■□□□ 1.44
CCDC144CPQ8IYA2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC24.04■■□□□ 1.44
CCDC144CPQ8IYA2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC144CPQ8IYA2 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC24.04■■□□□ 1.44
CCDC144CPQ8IYA2 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC144CPQ8IYA2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC24.03■■□□□ 1.44
CCDC144CPQ8IYA2 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC144CPQ8IYA2 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
CCDC144CPQ8IYA2 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC144CPQ8IYA2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC144CPQ8IYA2 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
CCDC144CPQ8IYA2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC144CPQ8IYA2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC144CPQ8IYA2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC144CPQ8IYA2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
CCDC144CPQ8IYA2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC24.03■■□□□ 1.44
CCDC144CPQ8IYA2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC24.03■■□□□ 1.44
CCDC144CPQ8IYA2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC144CPQ8IYA2 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC24.03■■□□□ 1.44
CCDC144CPQ8IYA2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC144CPQ8IYA2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC144CPQ8IYA2 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC144CPQ8IYA2 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC24.03■■□□□ 1.44
CCDC144CPQ8IYA2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC144CPQ8IYA2 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC24.03■■□□□ 1.44
CCDC144CPQ8IYA2 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CCDC144CPQ8IYA2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCDC144CPQ8IYA2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCDC144CPQ8IYA2 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
CCDC144CPQ8IYA2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC24.02■■□□□ 1.44
CCDC144CPQ8IYA2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CCDC144CPQ8IYA2 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCDC144CPQ8IYA2 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
CCDC144CPQ8IYA2 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCDC144CPQ8IYA2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC24.02■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms