Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.05■□□□□ 0.48
LINC00346Q8IVM7 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC00346Q8IVM7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC00346Q8IVM7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC00346Q8IVM7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.05■□□□□ 0.48
LINC00346Q8IVM7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.05■□□□□ 0.48
LINC00346Q8IVM7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
LINC00346Q8IVM7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC00346Q8IVM7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.05■□□□□ 0.48
LINC00346Q8IVM7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
LINC00346Q8IVM7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.05■□□□□ 0.48
LINC00346Q8IVM7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.05■□□□□ 0.48
LINC00346Q8IVM7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LINC00346Q8IVM7 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.05■□□□□ 0.48
LINC00346Q8IVM7 RBM17P2-201ENST00000616397 1405 ntBASIC18.05■□□□□ 0.48
LINC00346Q8IVM7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC00346Q8IVM7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LINC00346Q8IVM7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LINC00346Q8IVM7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC00346Q8IVM7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC00346Q8IVM7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
LINC00346Q8IVM7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC00346Q8IVM7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.04■□□□□ 0.48
LINC00346Q8IVM7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC00346Q8IVM7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.04■□□□□ 0.48
LINC00346Q8IVM7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
LINC00346Q8IVM7 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LINC00346Q8IVM7 AC091799.1-201ENST00000422823 811 ntBASIC18.04■□□□□ 0.48
LINC00346Q8IVM7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LINC00346Q8IVM7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.04■□□□□ 0.48
LINC00346Q8IVM7 NTF6G-201ENST00000591094 616 ntBASIC18.04■□□□□ 0.48
LINC00346Q8IVM7 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LINC00346Q8IVM7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.04■□□□□ 0.48
LINC00346Q8IVM7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
LINC00346Q8IVM7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC00346Q8IVM7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC00346Q8IVM7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC00346Q8IVM7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LINC00346Q8IVM7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.03■□□□□ 0.48
LINC00346Q8IVM7 AC112907.3-201ENST00000577781 2400 ntBASIC18.03■□□□□ 0.48
LINC00346Q8IVM7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC00346Q8IVM7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
LINC00346Q8IVM7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LINC00346Q8IVM7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.03■□□□□ 0.48
LINC00346Q8IVM7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
LINC00346Q8IVM7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.03■□□□□ 0.48
LINC00346Q8IVM7 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC00346Q8IVM7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC00346Q8IVM7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
LINC00346Q8IVM7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.03■□□□□ 0.48
LINC00346Q8IVM7 AC034268.1-201ENST00000441047 882 ntBASIC18.03■□□□□ 0.48
LINC00346Q8IVM7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.03■□□□□ 0.48
LINC00346Q8IVM7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
LINC00346Q8IVM7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.03■□□□□ 0.48
LINC00346Q8IVM7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.03■□□□□ 0.48
LINC00346Q8IVM7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC00346Q8IVM7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC00346Q8IVM7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
LINC00346Q8IVM7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.03■□□□□ 0.48
LINC00346Q8IVM7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LINC00346Q8IVM7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC00346Q8IVM7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
LINC00346Q8IVM7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC00346Q8IVM7 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC00346Q8IVM7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC00346Q8IVM7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.03■□□□□ 0.48
LINC00346Q8IVM7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC00346Q8IVM7 AC092720.2-201ENST00000602388 1665 ntBASIC18.03■□□□□ 0.48
LINC00346Q8IVM7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINC00346Q8IVM7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINC00346Q8IVM7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LINC00346Q8IVM7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LINC00346Q8IVM7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINC00346Q8IVM7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
LINC00346Q8IVM7 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINC00346Q8IVM7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.02■□□□□ 0.48
LINC00346Q8IVM7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.02■□□□□ 0.48
LINC00346Q8IVM7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LINC00346Q8IVM7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LINC00346Q8IVM7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
LINC00346Q8IVM7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINC00346Q8IVM7 AC087623.3-201ENST00000607047 1098 ntBASIC18.02■□□□□ 0.48
LINC00346Q8IVM7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.02■□□□□ 0.48
LINC00346Q8IVM7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINC00346Q8IVM7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LINC00346Q8IVM7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
LINC00346Q8IVM7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LINC00346Q8IVM7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LINC00346Q8IVM7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LINC00346Q8IVM7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LINC00346Q8IVM7 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
LINC00346Q8IVM7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LINC00346Q8IVM7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.01■□□□□ 0.47
LINC00346Q8IVM7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.01■□□□□ 0.47
LINC00346Q8IVM7 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC00346Q8IVM7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.01■□□□□ 0.47
LINC00346Q8IVM7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.01■□□□□ 0.47
LINC00346Q8IVM7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
LINC00346Q8IVM7 AC097381.1-201ENST00000429019 1296 ntBASIC18.01■□□□□ 0.47
LINC00346Q8IVM7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms