Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 COA1-206ENST00000418140 1372 ntTSL 1 (best)11.99□□□□□ -0.493e-6■■■□□ 17.1
LARP4Q71RC2 COA1-208ENST00000431651 720 ntAPPRIS ALT2 TSL 310.06□□□□□ -0.83e-6■■■□□ 17.1
LARP4Q71RC2 COA1-214ENST00000457939 406 ntTSL 39.89□□□□□ -0.833e-6■■■□□ 17.1
LARP4Q71RC2 COA1-213ENST00000451651 585 ntTSL 39.86□□□□□ -0.833e-6■■■□□ 17.1
LARP4Q71RC2 COA1-217ENST00000478504 552 ntTSL 49.66□□□□□ -0.863e-6■■■□□ 17.1
LARP4Q71RC2 COA1-202ENST00000310564 1085 ntAPPRIS P3 TSL 2 BASIC9.65□□□□□ -0.863e-6■■■□□ 17.1
LARP4Q71RC2 COA1-205ENST00000415798 524 ntAPPRIS ALT2 TSL 48.94□□□□□ -0.983e-6■■■□□ 17.1
LARP4Q71RC2 COA1-209ENST00000438444 3223 ntTSL 28.82□□□□□ -13e-6■■■□□ 17.1
LARP4Q71RC2 COA1-204ENST00000415076 1737 ntTSL 37.78□□□□□ -1.163e-6■■■□□ 17.1
LARP4Q71RC2 COA1-210ENST00000446330 1520 ntTSL 27.77□□□□□ -1.173e-6■■■□□ 17.1
LARP4Q71RC2 COA1-211ENST00000446564 1177 ntTSL 27.52□□□□□ -1.213e-6■■■□□ 17.1
LARP4Q71RC2 COA1-216ENST00000470156 569 ntTSL 1 (best)5.55□□□□□ -1.523e-6■■■□□ 17.1
LARP4Q71RC2 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.33□□□□□ -1.563e-6■■■□□ 17.1
LARP4Q71RC2 COA1-207ENST00000420441 547 ntTSL 25.04□□□□□ -1.63e-6■■■□□ 17.1
LARP4Q71RC2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.87■□□□□ 0.779e-8■■■□□ 17.1
LARP4Q71RC2 H2AFX-201ENST00000375167 1373 ntTSL 215.35■□□□□ 0.059e-8■■■□□ 17.1
LARP4Q71RC2 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.24■□□□□ 0.517e-6■■■□□ 17.1
LARP4Q71RC2 ZDHHC12-205ENST00000467312 2536 ntTSL 217.52■□□□□ 0.47e-6■■■□□ 17.1
LARP4Q71RC2 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.17e-6■■■□□ 17.1
LARP4Q71RC2 DBI-206ENST00000475783 842 ntTSL 1 (best)9.66□□□□□ -0.862e-11■■■□□ 17.1
LARP4Q71RC2 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.642e-7■■■□□ 17.1
LARP4Q71RC2 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.13■□□□□ 0.012e-7■■■□□ 17.1
LARP4Q71RC2 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.68□□□□□ -0.222e-7■■■□□ 17.1
LARP4Q71RC2 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.933e-7■■■□□ 17.1
LARP4Q71RC2 GNAI2-205ENST00000441156 2168 ntTSL 223.77■■□□□ 1.43e-7■■■□□ 17.1
LARP4Q71RC2 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.151e-7■■■□□ 17.1
LARP4Q71RC2 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.84□□□□□ -0.193e-7■■■□□ 17.1
LARP4Q71RC2 GNAI2-211ENST00000491100 3886 ntTSL 28.5□□□□□ -1.053e-7■■■□□ 17.1
LARP4Q71RC2 FGFR4-213ENST00000511076 838 ntTSL 518.09■□□□□ 0.492e-6■■■□□ 17.1
LARP4Q71RC2 RPS9-209ENST00000448962 2384 ntTSL 215.31■□□□□ 0.041e-38■■■□□ 17
LARP4Q71RC2 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.351e-38■■■□□ 17
LARP4Q71RC2 RPS9-206ENST00000436445 752 ntTSL 212.88□□□□□ -0.351e-38■■■□□ 17
LARP4Q71RC2 RPS9-211ENST00000484121 897 ntTSL 212.33□□□□□ -0.441e-38■■■□□ 17
LARP4Q71RC2 RPS9-213ENST00000626547 476 ntTSL 2 BASIC11.66□□□□□ -0.541e-38■■■□□ 17
LARP4Q71RC2 C19orf60-206ENST00000598375 1792 ntTSL 522.15■■□□□ 1.146e-7■■■□□ 17
LARP4Q71RC2 C19orf60-207ENST00000600997 2275 ntTSL 220.74■□□□□ 0.916e-7■■■□□ 17
LARP4Q71RC2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.866e-7■■■□□ 17
LARP4Q71RC2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.866e-7■■■□□ 17
LARP4Q71RC2 C19orf60-205ENST00000597371 1081 ntTSL 319.73■□□□□ 0.756e-7■■■□□ 17
LARP4Q71RC2 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.94■□□□□ 0.146e-9■■■□□ 17
LARP4Q71RC2 C19orf60-208ENST00000601736 491 ntTSL 215.7■□□□□ 0.16e-7■■■□□ 17
LARP4Q71RC2 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.056e-9■■■□□ 17
LARP4Q71RC2 C19orf60-204ENST00000595490 410 ntTSL 315.3■□□□□ 0.046e-7■■■□□ 17
LARP4Q71RC2 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15□□□□□ -0.016e-9■■■□□ 17
LARP4Q71RC2 C19orf60-203ENST00000595077 2465 nt14.26□□□□□ -0.136e-7■■■□□ 17
LARP4Q71RC2 HFM1-204ENST00000448819 540 ntTSL 58.43□□□□□ -1.069e-13■■■□□ 17
LARP4Q71RC2 HFM1-202ENST00000427444 672 ntTSL 58.12□□□□□ -1.119e-13■■■□□ 17
LARP4Q71RC2 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.29□□□□□ -1.566e-7■■■□□ 17
LARP4Q71RC2 GSTO1-203ENST00000432659 592 ntTSL 24.85□□□□□ -1.636e-9■■■□□ 17
LARP4Q71RC2 AL391358.1-201ENST00000605342 190 ntBASIC4.45□□□□□ -1.76e-7■■■□□ 17
LARP4Q71RC2 HFM1-208ENST00000488023 1699 ntTSL 54.03□□□□□ -1.769e-13■■■□□ 17
LARP4Q71RC2 HFM1-207ENST00000481900 2020 ntTSL 53.9□□□□□ -1.799e-13■■■□□ 17
LARP4Q71RC2 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.159e-13■■■□□ 17
LARP4Q71RC2 FIS1-208ENST00000480497 530 ntTSL 315.23■□□□□ 0.032e-6■■■□□ 17
LARP4Q71RC2 ANKRD11-202ENST00000330736 8342 ntTSL 512.86□□□□□ -0.353e-6■■■□□ 17
LARP4Q71RC2 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.554e-9■■■□□ 17
LARP4Q71RC2 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.45■□□□□ 0.384e-9■■■□□ 17
LARP4Q71RC2 CHCHD10-204ENST00000520222 384 ntTSL 3 BASIC12.63□□□□□ -0.394e-9■■■□□ 17
LARP4Q71RC2 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.534e-8■■■□□ 17
LARP4Q71RC2 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.08■□□□□ 0.494e-8■■■□□ 17
LARP4Q71RC2 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.114e-8■■■□□ 17
LARP4Q71RC2 LAMTOR2-205ENST00000487106 623 ntTSL 214.62□□□□□ -0.072e-6■■■□□ 17
LARP4Q71RC2 NRBP1-206ENST00000460499 2561 ntTSL 213.11□□□□□ -0.314e-8■■■□□ 17
LARP4Q71RC2 LAMTOR2-203ENST00000368305 655 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.662e-6■■■□□ 17
LARP4Q71RC2 LAMTOR2-201ENST00000368302 587 ntTSL 3 BASIC10.16□□□□□ -0.782e-6■■■□□ 17
LARP4Q71RC2 LAMTOR2-202ENST00000368304 521 ntTSL 2 BASIC9.57□□□□□ -0.882e-6■■■□□ 17
LARP4Q71RC2 LAMTOR2-204ENST00000463371 462 ntTSL 36.31□□□□□ -1.42e-6■■■□□ 17
LARP4Q71RC2 SRM-204ENST00000475189 545 ntTSL 214.96□□□□□ -0.012e-7■■■□□ 17
LARP4Q71RC2 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.074e-9■■■□□ 17
LARP4Q71RC2 C12orf57-207ENST00000545581 556 ntTSL 38.52□□□□□ -1.053e-15■■■□□ 17
LARP4Q71RC2 ANKRD12-202ENST00000359158 2250 ntTSL 22.6□□□□□ -1.991e-7■■■□□ 17
LARP4Q71RC2 ATP5O-203ENST00000418933 415 ntTSL 55.57□□□□□ -1.521e-6■■■□□ 17
LARP4Q71RC2 DBI-205ENST00000460901 774 ntTSL 1 (best)16.25■□□□□ 0.192e-11■■■□□ 17
LARP4Q71RC2 NME2-208ENST00000570801 565 ntTSL 212.61□□□□□ -0.392e-8■■■□□ 17
LARP4Q71RC2 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.981e-7■■■□□ 17
LARP4Q71RC2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.65■□□□□ 0.91e-7■■■□□ 17
LARP4Q71RC2 SYNGR2-204ENST00000589168 2125 ntTSL 218.28■□□□□ 0.521e-7■■■□□ 17
LARP4Q71RC2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.94■□□□□ 0.31e-7■■■□□ 17
LARP4Q71RC2 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.181e-7■■■□□ 17
LARP4Q71RC2 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.32■□□□□ 0.041e-7■■■□□ 17
LARP4Q71RC2 SYNGR2-209ENST00000592456 3036 nt12.24□□□□□ -0.451e-7■■■□□ 17
LARP4Q71RC2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.49■■□□□ 1.512e-11■■■□□ 17
LARP4Q71RC2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.442e-11■■■□□ 17
LARP4Q71RC2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24■■□□□ 1.432e-11■■■□□ 17
LARP4Q71RC2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24■■□□□ 1.432e-11■■■□□ 17
LARP4Q71RC2 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.58■■□□□ 1.362e-11■■■□□ 17
LARP4Q71RC2 CALR-202ENST00000586760 913 ntTSL 210.76□□□□□ -0.699e-32■■■□□ 17
LARP4Q71RC2 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.552e-6■■■□□ 17
LARP4Q71RC2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.012e-8■■■□□ 17
LARP4Q71RC2 CDC25B-206ENST00000467519 1960 ntTSL 1 (best)17.86■□□□□ 0.452e-8■■■□□ 17
LARP4Q71RC2 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.422e-8■■■□□ 17
LARP4Q71RC2 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.82■□□□□ 0.282e-8■■■□□ 17
LARP4Q71RC2 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.192e-8■■■□□ 17
LARP4Q71RC2 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.037e-7■■■□□ 17
LARP4Q71RC2 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.212e-8■■■□□ 17
LARP4Q71RC2 MAN1B1-213ENST00000544448 2090 ntTSL 1 (best)13.67□□□□□ -0.222e-8■■■□□ 17
LARP4Q71RC2 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.242e-8■■■□□ 17
LARP4Q71RC2 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC13.22□□□□□ -0.292e-8■■■□□ 17
LARP4Q71RC2 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.392e-8■■■□□ 17
LARP4Q71RC2 RAB5C-204ENST00000547517 1167 ntTSL 1 (best) BASIC10.83□□□□□ -0.682e-8■■■□□ 17
Retrieved 100 of 15,922 protein–RNA pairs in 263.6 ms