Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.2■□□□□ 0.98
FOXR1Q6PIV2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
FOXR1Q6PIV2 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
FOXR1Q6PIV2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.2■□□□□ 0.98
FOXR1Q6PIV2 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXR1Q6PIV2 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXR1Q6PIV2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.2■□□□□ 0.98
FOXR1Q6PIV2 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXR1Q6PIV2 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.2■□□□□ 0.98
FOXR1Q6PIV2 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXR1Q6PIV2 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXR1Q6PIV2 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXR1Q6PIV2 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXR1Q6PIV2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXR1Q6PIV2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
FOXR1Q6PIV2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.19■□□□□ 0.98
FOXR1Q6PIV2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
FOXR1Q6PIV2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
FOXR1Q6PIV2 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.19■□□□□ 0.98
FOXR1Q6PIV2 AC016769.1-201ENST00000409132 1010 ntBASIC21.19■□□□□ 0.98
FOXR1Q6PIV2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
FOXR1Q6PIV2 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
FOXR1Q6PIV2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
FOXR1Q6PIV2 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXR1Q6PIV2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.19■□□□□ 0.98
FOXR1Q6PIV2 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
FOXR1Q6PIV2 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXR1Q6PIV2 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.19■□□□□ 0.98
FOXR1Q6PIV2 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
FOXR1Q6PIV2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
FOXR1Q6PIV2 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
FOXR1Q6PIV2 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.18■□□□□ 0.98
FOXR1Q6PIV2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FOXR1Q6PIV2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FOXR1Q6PIV2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.18■□□□□ 0.98
FOXR1Q6PIV2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
FOXR1Q6PIV2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.18■□□□□ 0.98
FOXR1Q6PIV2 HLA-L-209ENST00000420110 1011 ntBASIC21.18■□□□□ 0.98
FOXR1Q6PIV2 DUX4L4-201ENST00000566884 1269 ntBASIC21.18■□□□□ 0.98
FOXR1Q6PIV2 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FOXR1Q6PIV2 FP325331.1-202ENST00000623531 1380 ntBASIC21.18■□□□□ 0.98
FOXR1Q6PIV2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.18■□□□□ 0.98
FOXR1Q6PIV2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
FOXR1Q6PIV2 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FOXR1Q6PIV2 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.17■□□□□ 0.98
FOXR1Q6PIV2 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXR1Q6PIV2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXR1Q6PIV2 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXR1Q6PIV2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.17■□□□□ 0.98
FOXR1Q6PIV2 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.17■□□□□ 0.98
FOXR1Q6PIV2 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.17■□□□□ 0.98
FOXR1Q6PIV2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.17■□□□□ 0.98
FOXR1Q6PIV2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXR1Q6PIV2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.17■□□□□ 0.98
FOXR1Q6PIV2 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.17■□□□□ 0.98
FOXR1Q6PIV2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXR1Q6PIV2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.17■□□□□ 0.98
FOXR1Q6PIV2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.17■□□□□ 0.98
FOXR1Q6PIV2 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXR1Q6PIV2 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXR1Q6PIV2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
FOXR1Q6PIV2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
FOXR1Q6PIV2 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXR1Q6PIV2 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXR1Q6PIV2 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXR1Q6PIV2 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXR1Q6PIV2 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXR1Q6PIV2 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXR1Q6PIV2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.16■□□□□ 0.98
FOXR1Q6PIV2 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
FOXR1Q6PIV2 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXR1Q6PIV2 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
FOXR1Q6PIV2 LINC01529-204ENST00000636474 1715 ntBASIC21.16■□□□□ 0.98
FOXR1Q6PIV2 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
FOXR1Q6PIV2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
FOXR1Q6PIV2 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXR1Q6PIV2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
FOXR1Q6PIV2 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXR1Q6PIV2 AP005435.1-201ENST00000529293 1178 ntBASIC21.16■□□□□ 0.98
FOXR1Q6PIV2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
FOXR1Q6PIV2 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
FOXR1Q6PIV2 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
FOXR1Q6PIV2 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXR1Q6PIV2 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXR1Q6PIV2 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXR1Q6PIV2 AC005082.1-201ENST00000413042 2259 ntBASIC21.16■□□□□ 0.98
FOXR1Q6PIV2 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXR1Q6PIV2 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
FOXR1Q6PIV2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
FOXR1Q6PIV2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
FOXR1Q6PIV2 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FOXR1Q6PIV2 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
FOXR1Q6PIV2 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
FOXR1Q6PIV2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.15■□□□□ 0.98
FOXR1Q6PIV2 AC137761.2-201ENST00000561729 223 ntBASIC21.15■□□□□ 0.98
FOXR1Q6PIV2 AC145350.3-201ENST00000569033 163 ntBASIC21.15■□□□□ 0.98
FOXR1Q6PIV2 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
FOXR1Q6PIV2 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
FOXR1Q6PIV2 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.15■□□□□ 0.98
FOXR1Q6PIV2 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms