Protein–RNA interactions for Protein: Q5TB30

DEPDC1, DEP domain-containing protein 1A, humanhuman

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1Q5TB30 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DEPDC1Q5TB30 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.72■□□□□ 0.75
DEPDC1Q5TB30 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
DEPDC1Q5TB30 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DEPDC1Q5TB30 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
DEPDC1Q5TB30 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DEPDC1Q5TB30 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
DEPDC1Q5TB30 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
DEPDC1Q5TB30 KRT18P11-201ENST00000435214 1283 ntBASIC19.72■□□□□ 0.75
DEPDC1Q5TB30 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
DEPDC1Q5TB30 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DEPDC1Q5TB30 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.72■□□□□ 0.75
DEPDC1Q5TB30 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.72■□□□□ 0.75
DEPDC1Q5TB30 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.72■□□□□ 0.75
DEPDC1Q5TB30 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
DEPDC1Q5TB30 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DEPDC1Q5TB30 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DEPDC1Q5TB30 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DEPDC1Q5TB30 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DEPDC1Q5TB30 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.71■□□□□ 0.75
DEPDC1Q5TB30 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DEPDC1Q5TB30 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DEPDC1Q5TB30 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
DEPDC1Q5TB30 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DEPDC1Q5TB30 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DEPDC1Q5TB30 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.71■□□□□ 0.75
DEPDC1Q5TB30 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
DEPDC1Q5TB30 AC091799.1-201ENST00000422823 811 ntBASIC19.71■□□□□ 0.75
DEPDC1Q5TB30 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.71■□□□□ 0.75
DEPDC1Q5TB30 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.71■□□□□ 0.75
DEPDC1Q5TB30 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.71■□□□□ 0.75
DEPDC1Q5TB30 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
DEPDC1Q5TB30 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
DEPDC1Q5TB30 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
DEPDC1Q5TB30 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.71■□□□□ 0.75
DEPDC1Q5TB30 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
DEPDC1Q5TB30 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.71■□□□□ 0.75
DEPDC1Q5TB30 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DEPDC1Q5TB30 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DEPDC1Q5TB30 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DEPDC1Q5TB30 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.71■□□□□ 0.75
DEPDC1Q5TB30 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DEPDC1Q5TB30 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
DEPDC1Q5TB30 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DEPDC1Q5TB30 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DEPDC1Q5TB30 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DEPDC1Q5TB30 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DEPDC1Q5TB30 AC116050.2-201ENST00000612102 1779 ntBASIC19.7■□□□□ 0.74
DEPDC1Q5TB30 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.7■□□□□ 0.74
DEPDC1Q5TB30 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.7■□□□□ 0.74
DEPDC1Q5TB30 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.7■□□□□ 0.74
DEPDC1Q5TB30 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DEPDC1Q5TB30 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.7■□□□□ 0.74
DEPDC1Q5TB30 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.7■□□□□ 0.74
DEPDC1Q5TB30 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.7■□□□□ 0.74
DEPDC1Q5TB30 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.7■□□□□ 0.74
DEPDC1Q5TB30 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.7■□□□□ 0.74
DEPDC1Q5TB30 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DEPDC1Q5TB30 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
DEPDC1Q5TB30 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
DEPDC1Q5TB30 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
DEPDC1Q5TB30 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DEPDC1Q5TB30 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DEPDC1Q5TB30 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
DEPDC1Q5TB30 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
DEPDC1Q5TB30 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
DEPDC1Q5TB30 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
DEPDC1Q5TB30 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
DEPDC1Q5TB30 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DEPDC1Q5TB30 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DEPDC1Q5TB30 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
DEPDC1Q5TB30 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
DEPDC1Q5TB30 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.69■□□□□ 0.74
DEPDC1Q5TB30 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.69■□□□□ 0.74
DEPDC1Q5TB30 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
DEPDC1Q5TB30 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.69■□□□□ 0.74
DEPDC1Q5TB30 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
DEPDC1Q5TB30 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.69■□□□□ 0.74
DEPDC1Q5TB30 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DEPDC1Q5TB30 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DEPDC1Q5TB30 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.69■□□□□ 0.74
DEPDC1Q5TB30 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.68■□□□□ 0.74
DEPDC1Q5TB30 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
DEPDC1Q5TB30 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
DEPDC1Q5TB30 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.68■□□□□ 0.74
DEPDC1Q5TB30 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DEPDC1Q5TB30 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DEPDC1Q5TB30 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
DEPDC1Q5TB30 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
DEPDC1Q5TB30 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
DEPDC1Q5TB30 MIR935-201ENST00000401179 91 ntBASIC19.68■□□□□ 0.74
DEPDC1Q5TB30 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.68■□□□□ 0.74
DEPDC1Q5TB30 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
DEPDC1Q5TB30 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.68■□□□□ 0.74
DEPDC1Q5TB30 AC010536.3-201ENST00000620306 533 ntBASIC19.68■□□□□ 0.74
DEPDC1Q5TB30 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
DEPDC1Q5TB30 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.68■□□□□ 0.74
DEPDC1Q5TB30 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
DEPDC1Q5TB30 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
DEPDC1Q5TB30 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms