Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRICKLE4Q2TBC4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.03■□□□□ 0.64
PRICKLE4Q2TBC4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRICKLE4Q2TBC4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRICKLE4Q2TBC4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRICKLE4Q2TBC4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PRICKLE4Q2TBC4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRICKLE4Q2TBC4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRICKLE4Q2TBC4 AC006970.2-201ENST00000450065 779 ntBASIC19.03■□□□□ 0.64
PRICKLE4Q2TBC4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PRICKLE4Q2TBC4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRICKLE4Q2TBC4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.03■□□□□ 0.64
PRICKLE4Q2TBC4 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.03■□□□□ 0.64
PRICKLE4Q2TBC4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.03■□□□□ 0.64
PRICKLE4Q2TBC4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.03■□□□□ 0.64
PRICKLE4Q2TBC4 CYP2T3P-201ENST00000601990 817 ntBASIC19.03■□□□□ 0.64
PRICKLE4Q2TBC4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PRICKLE4Q2TBC4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRICKLE4Q2TBC4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRICKLE4Q2TBC4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.03■□□□□ 0.64
PRICKLE4Q2TBC4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRICKLE4Q2TBC4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRICKLE4Q2TBC4 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRICKLE4Q2TBC4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PRICKLE4Q2TBC4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.03■□□□□ 0.64
PRICKLE4Q2TBC4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.03■□□□□ 0.64
PRICKLE4Q2TBC4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PRICKLE4Q2TBC4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRICKLE4Q2TBC4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.02■□□□□ 0.64
PRICKLE4Q2TBC4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
PRICKLE4Q2TBC4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
PRICKLE4Q2TBC4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRICKLE4Q2TBC4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRICKLE4Q2TBC4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRICKLE4Q2TBC4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.02■□□□□ 0.64
PRICKLE4Q2TBC4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRICKLE4Q2TBC4 AF201337.1-201ENST00000520239 748 ntBASIC19.02■□□□□ 0.64
PRICKLE4Q2TBC4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.02■□□□□ 0.64
PRICKLE4Q2TBC4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
PRICKLE4Q2TBC4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRICKLE4Q2TBC4 GABARAPL3-202ENST00000624044 1851 ntBASIC19.02■□□□□ 0.64
PRICKLE4Q2TBC4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
PRICKLE4Q2TBC4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PRICKLE4Q2TBC4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
PRICKLE4Q2TBC4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PRICKLE4Q2TBC4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
PRICKLE4Q2TBC4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
PRICKLE4Q2TBC4 AC020907.5-201ENST00000624372 1936 ntBASIC19.02■□□□□ 0.63
PRICKLE4Q2TBC4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.01■□□□□ 0.63
PRICKLE4Q2TBC4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
PRICKLE4Q2TBC4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PRICKLE4Q2TBC4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
PRICKLE4Q2TBC4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.01■□□□□ 0.63
PRICKLE4Q2TBC4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PRICKLE4Q2TBC4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRICKLE4Q2TBC4 LINC01006-201ENST00000333319 2292 ntBASIC19.01■□□□□ 0.63
PRICKLE4Q2TBC4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRICKLE4Q2TBC4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.01■□□□□ 0.63
PRICKLE4Q2TBC4 AL355472.2-201ENST00000422958 438 ntBASIC19.01■□□□□ 0.63
PRICKLE4Q2TBC4 AC105036.2-201ENST00000569468 176 ntBASIC19.01■□□□□ 0.63
PRICKLE4Q2TBC4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.01■□□□□ 0.63
PRICKLE4Q2TBC4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PRICKLE4Q2TBC4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.01■□□□□ 0.63
PRICKLE4Q2TBC4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PRICKLE4Q2TBC4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRICKLE4Q2TBC4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRICKLE4Q2TBC4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRICKLE4Q2TBC4 AC092720.2-201ENST00000602388 1665 ntBASIC19.01■□□□□ 0.63
PRICKLE4Q2TBC4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.01■□□□□ 0.63
PRICKLE4Q2TBC4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PRICKLE4Q2TBC4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PRICKLE4Q2TBC4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PRICKLE4Q2TBC4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19■□□□□ 0.63
PRICKLE4Q2TBC4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PRICKLE4Q2TBC4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PRICKLE4Q2TBC4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19■□□□□ 0.63
PRICKLE4Q2TBC4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRICKLE4Q2TBC4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19■□□□□ 0.63
PRICKLE4Q2TBC4 KRT18P68-201ENST00000392293 1000 ntBASIC19■□□□□ 0.63
PRICKLE4Q2TBC4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19■□□□□ 0.63
PRICKLE4Q2TBC4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19■□□□□ 0.63
PRICKLE4Q2TBC4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19■□□□□ 0.63
PRICKLE4Q2TBC4 AL121832.2-201ENST00000610979 668 ntBASIC19■□□□□ 0.63
PRICKLE4Q2TBC4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PRICKLE4Q2TBC4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19■□□□□ 0.63
PRICKLE4Q2TBC4 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRICKLE4Q2TBC4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
PRICKLE4Q2TBC4 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRICKLE4Q2TBC4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PRICKLE4Q2TBC4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19■□□□□ 0.63
PRICKLE4Q2TBC4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PRICKLE4Q2TBC4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19■□□□□ 0.63
PRICKLE4Q2TBC4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19■□□□□ 0.63
PRICKLE4Q2TBC4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
PRICKLE4Q2TBC4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRICKLE4Q2TBC4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRICKLE4Q2TBC4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRICKLE4Q2TBC4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRICKLE4Q2TBC4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRICKLE4Q2TBC4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms