Protein–RNA interactions for Protein: Q06547

GABPB1, GA-binding protein subunit beta-1, humanhuman

Predicted RBP Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1Q06547 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GABPB1Q06547 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GABPB1Q06547 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.95■□□□□ 0.94
GABPB1Q06547 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
GABPB1Q06547 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GABPB1Q06547 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.95■□□□□ 0.94
GABPB1Q06547 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
GABPB1Q06547 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.95■□□□□ 0.94
GABPB1Q06547 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GABPB1Q06547 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
GABPB1Q06547 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
GABPB1Q06547 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
GABPB1Q06547 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.94■□□□□ 0.94
GABPB1Q06547 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
GABPB1Q06547 AC068880.1-201ENST00000507289 2297 ntBASIC20.94■□□□□ 0.94
GABPB1Q06547 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.94■□□□□ 0.94
GABPB1Q06547 LINC01465-201ENST00000408887 1940 ntBASIC20.94■□□□□ 0.94
GABPB1Q06547 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.94■□□□□ 0.94
GABPB1Q06547 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
GABPB1Q06547 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
GABPB1Q06547 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GABPB1Q06547 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
GABPB1Q06547 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GABPB1Q06547 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.94■□□□□ 0.94
GABPB1Q06547 AL162393.1-201ENST00000437852 946 ntBASIC20.94■□□□□ 0.94
GABPB1Q06547 AC026202.3-201ENST00000600805 1127 ntBASIC20.94■□□□□ 0.94
GABPB1Q06547 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
GABPB1Q06547 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GABPB1Q06547 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
GABPB1Q06547 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.94■□□□□ 0.94
GABPB1Q06547 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.94■□□□□ 0.94
GABPB1Q06547 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
GABPB1Q06547 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
GABPB1Q06547 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.94■□□□□ 0.94
GABPB1Q06547 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
GABPB1Q06547 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.93■□□□□ 0.94
GABPB1Q06547 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GABPB1Q06547 AC106820.2-201ENST00000563775 3264 ntBASIC20.93■□□□□ 0.94
GABPB1Q06547 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
GABPB1Q06547 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
GABPB1Q06547 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
GABPB1Q06547 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
GABPB1Q06547 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
GABPB1Q06547 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.93■□□□□ 0.94
GABPB1Q06547 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.93■□□□□ 0.94
GABPB1Q06547 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.93■□□□□ 0.94
GABPB1Q06547 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GABPB1Q06547 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
GABPB1Q06547 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
GABPB1Q06547 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
GABPB1Q06547 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
GABPB1Q06547 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
GABPB1Q06547 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
GABPB1Q06547 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GABPB1Q06547 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.92■□□□□ 0.94
GABPB1Q06547 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
GABPB1Q06547 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GABPB1Q06547 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.92■□□□□ 0.94
GABPB1Q06547 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GABPB1Q06547 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
GABPB1Q06547 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
GABPB1Q06547 AC099398.1-201ENST00000567919 2776 ntBASIC20.92■□□□□ 0.94
GABPB1Q06547 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.92■□□□□ 0.94
GABPB1Q06547 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.92■□□□□ 0.94
GABPB1Q06547 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.92■□□□□ 0.94
GABPB1Q06547 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GABPB1Q06547 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.92■□□□□ 0.94
GABPB1Q06547 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
GABPB1Q06547 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GABPB1Q06547 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GABPB1Q06547 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GABPB1Q06547 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GABPB1Q06547 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GABPB1Q06547 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GABPB1Q06547 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GABPB1Q06547 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
GABPB1Q06547 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
GABPB1Q06547 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GABPB1Q06547 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
GABPB1Q06547 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
GABPB1Q06547 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
GABPB1Q06547 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.91■□□□□ 0.94
GABPB1Q06547 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.91■□□□□ 0.94
GABPB1Q06547 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
GABPB1Q06547 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.91■□□□□ 0.94
GABPB1Q06547 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.91■□□□□ 0.94
GABPB1Q06547 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
GABPB1Q06547 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GABPB1Q06547 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.9■□□□□ 0.94
GABPB1Q06547 CROCCP3-202ENST00000420820 1947 ntBASIC20.9■□□□□ 0.94
GABPB1Q06547 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
GABPB1Q06547 AC012313.1-201ENST00000593393 3059 ntBASIC20.9■□□□□ 0.94
GABPB1Q06547 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.9■□□□□ 0.94
GABPB1Q06547 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
GABPB1Q06547 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
GABPB1Q06547 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
GABPB1Q06547 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GABPB1Q06547 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.9■□□□□ 0.94
GABPB1Q06547 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.9■□□□□ 0.94
GABPB1Q06547 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms