Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NKX6-1P78426 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.93■□□□□ 0.46
NKX6-1P78426 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.93■□□□□ 0.46
NKX6-1P78426 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.93■□□□□ 0.46
NKX6-1P78426 MYC-209ENST00000641252 345 ntBASIC17.93■□□□□ 0.46
NKX6-1P78426 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX6-1P78426 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX6-1P78426 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX6-1P78426 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.93■□□□□ 0.46
NKX6-1P78426 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NKX6-1P78426 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
NKX6-1P78426 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.93■□□□□ 0.46
NKX6-1P78426 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NKX6-1P78426 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
NKX6-1P78426 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.93■□□□□ 0.46
NKX6-1P78426 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
NKX6-1P78426 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX6-1P78426 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX6-1P78426 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.92■□□□□ 0.46
NKX6-1P78426 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.92■□□□□ 0.46
NKX6-1P78426 AL137060.1-201ENST00000618151 2648 ntBASIC17.92■□□□□ 0.46
NKX6-1P78426 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.92■□□□□ 0.46
NKX6-1P78426 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX6-1P78426 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX6-1P78426 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
NKX6-1P78426 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX6-1P78426 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
NKX6-1P78426 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
NKX6-1P78426 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.92■□□□□ 0.46
NKX6-1P78426 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.92■□□□□ 0.46
NKX6-1P78426 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.92■□□□□ 0.46
NKX6-1P78426 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NKX6-1P78426 AL591742.1-201ENST00000604433 565 ntBASIC17.92■□□□□ 0.46
NKX6-1P78426 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.92■□□□□ 0.46
NKX6-1P78426 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX6-1P78426 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX6-1P78426 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NKX6-1P78426 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.92■□□□□ 0.46
NKX6-1P78426 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.91■□□□□ 0.46
NKX6-1P78426 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX6-1P78426 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NKX6-1P78426 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.91■□□□□ 0.46
NKX6-1P78426 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.91■□□□□ 0.46
NKX6-1P78426 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NKX6-1P78426 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX6-1P78426 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX6-1P78426 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX6-1P78426 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NKX6-1P78426 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
NKX6-1P78426 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
NKX6-1P78426 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
NKX6-1P78426 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX6-1P78426 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX6-1P78426 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX6-1P78426 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.91■□□□□ 0.46
NKX6-1P78426 AC091799.1-201ENST00000422823 811 ntBASIC17.91■□□□□ 0.46
NKX6-1P78426 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NKX6-1P78426 UNC93B4-201ENST00000505679 747 ntBASIC17.91■□□□□ 0.46
NKX6-1P78426 AC091874.3-201ENST00000512672 1195 ntBASIC17.91■□□□□ 0.46
NKX6-1P78426 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NKX6-1P78426 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NKX6-1P78426 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.91■□□□□ 0.46
NKX6-1P78426 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NKX6-1P78426 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.91■□□□□ 0.46
NKX6-1P78426 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX6-1P78426 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NKX6-1P78426 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NKX6-1P78426 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NKX6-1P78426 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.9■□□□□ 0.46
NKX6-1P78426 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.9■□□□□ 0.46
NKX6-1P78426 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
NKX6-1P78426 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
NKX6-1P78426 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NKX6-1P78426 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.9■□□□□ 0.46
NKX6-1P78426 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.9■□□□□ 0.46
NKX6-1P78426 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NKX6-1P78426 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.9■□□□□ 0.46
NKX6-1P78426 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NKX6-1P78426 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NKX6-1P78426 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NKX6-1P78426 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
NKX6-1P78426 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NKX6-1P78426 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.89■□□□□ 0.46
NKX6-1P78426 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.89■□□□□ 0.45
NKX6-1P78426 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NKX6-1P78426 AC138932.1-201ENST00000534164 6830 ntBASIC17.89■□□□□ 0.45
NKX6-1P78426 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NKX6-1P78426 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NKX6-1P78426 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NKX6-1P78426 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.89■□□□□ 0.45
NKX6-1P78426 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NKX6-1P78426 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NKX6-1P78426 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NKX6-1P78426 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NKX6-1P78426 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.89■□□□□ 0.45
NKX6-1P78426 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NKX6-1P78426 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
NKX6-1P78426 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.89■□□□□ 0.45
NKX6-1P78426 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.89■□□□□ 0.45
NKX6-1P78426 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms