Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.44■□□□□ 0.54
RPS4XP62701 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.44■□□□□ 0.54
RPS4XP62701 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
RPS4XP62701 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.44■□□□□ 0.54
RPS4XP62701 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.44■□□□□ 0.54
RPS4XP62701 AC104771.1-201ENST00000603335 964 ntBASIC18.44■□□□□ 0.54
RPS4XP62701 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.44■□□□□ 0.54
RPS4XP62701 MIR2861-201ENST00000636310 90 ntBASIC18.44■□□□□ 0.54
RPS4XP62701 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.44■□□□□ 0.54
RPS4XP62701 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RPS4XP62701 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPS4XP62701 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPS4XP62701 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPS4XP62701 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPS4XP62701 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RPS4XP62701 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.43■□□□□ 0.54
RPS4XP62701 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPS4XP62701 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPS4XP62701 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPS4XP62701 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RPS4XP62701 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPS4XP62701 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.43■□□□□ 0.54
RPS4XP62701 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.43■□□□□ 0.54
RPS4XP62701 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPS4XP62701 AL109923.1-201ENST00000618799 583 ntBASIC18.43■□□□□ 0.54
RPS4XP62701 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
RPS4XP62701 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPS4XP62701 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPS4XP62701 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RPS4XP62701 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPS4XP62701 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
RPS4XP62701 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPS4XP62701 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPS4XP62701 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPS4XP62701 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.42■□□□□ 0.54
RPS4XP62701 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.42■□□□□ 0.54
RPS4XP62701 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPS4XP62701 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RPS4XP62701 AC092720.2-201ENST00000602388 1665 ntBASIC18.42■□□□□ 0.54
RPS4XP62701 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.42■□□□□ 0.54
RPS4XP62701 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RPS4XP62701 MIR663A-201ENST00000385250 93 ntBASIC18.42■□□□□ 0.54
RPS4XP62701 CROCCP5-201ENST00000436658 830 ntBASIC18.42■□□□□ 0.54
RPS4XP62701 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RPS4XP62701 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.42■□□□□ 0.54
RPS4XP62701 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPS4XP62701 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.42■□□□□ 0.54
RPS4XP62701 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPS4XP62701 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPS4XP62701 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.42■□□□□ 0.54
RPS4XP62701 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPS4XP62701 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPS4XP62701 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPS4XP62701 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPS4XP62701 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RPS4XP62701 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPS4XP62701 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPS4XP62701 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RPS4XP62701 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPS4XP62701 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.41■□□□□ 0.54
RPS4XP62701 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RPS4XP62701 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPS4XP62701 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.41■□□□□ 0.54
RPS4XP62701 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.41■□□□□ 0.54
RPS4XP62701 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.41■□□□□ 0.54
RPS4XP62701 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.41■□□□□ 0.54
RPS4XP62701 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPS4XP62701 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPS4XP62701 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RPS4XP62701 AL355802.2-201ENST00000402069 882 ntBASIC18.41■□□□□ 0.54
RPS4XP62701 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.41■□□□□ 0.54
RPS4XP62701 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.41■□□□□ 0.54
RPS4XP62701 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.41■□□□□ 0.54
RPS4XP62701 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.41■□□□□ 0.54
RPS4XP62701 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.41■□□□□ 0.54
RPS4XP62701 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPS4XP62701 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.41■□□□□ 0.54
RPS4XP62701 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.41■□□□□ 0.54
RPS4XP62701 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.41■□□□□ 0.54
RPS4XP62701 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RPS4XP62701 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPS4XP62701 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RPS4XP62701 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RPS4XP62701 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPS4XP62701 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPS4XP62701 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.4■□□□□ 0.54
RPS4XP62701 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.4■□□□□ 0.54
RPS4XP62701 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RPS4XP62701 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.4■□□□□ 0.54
RPS4XP62701 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.4■□□□□ 0.54
RPS4XP62701 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
RPS4XP62701 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RPS4XP62701 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RPS4XP62701 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPS4XP62701 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RPS4XP62701 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.4■□□□□ 0.54
RPS4XP62701 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.4■□□□□ 0.54
RPS4XP62701 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.4■□□□□ 0.54
RPS4XP62701 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RPS4XP62701 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms